RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 PDE1AP54750 535 aa20.12■□□□□ 0.81
SLX4-202ENST00000466154 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
SLX4-202ENST00000466154 SSH2Q76I76 1423 aa20.11■□□□□ 0.81
SLX4-202ENST00000466154 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
SLX4-202ENST00000466154 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
SLX4-202ENST00000466154 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
SLX4-202ENST00000466154 XRCC6P12956 609 aaKnown RBP eCLIP20.1■□□□□ 0.81
SLX4-202ENST00000466154 NBPF6Q5VWK0 638 aa20.1■□□□□ 0.81
SLX4-202ENST00000466154 NBPF4Q96M43 638 aa20.1■□□□□ 0.81
SLX4-202ENST00000466154 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
SLX4-202ENST00000466154 DIP2AQ14689 1571 aa20.1■□□□□ 0.81
SLX4-202ENST00000466154 KCNQ3O43525 872 aa20.1■□□□□ 0.81
SLX4-202ENST00000466154 GNAI3P08754 354 aa20.09■□□□□ 0.81
SLX4-202ENST00000466154 RABEP1Q15276 862 aa20.09■□□□□ 0.81
SLX4-202ENST00000466154 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
SLX4-202ENST00000466154 ANO2Q9NQ90 1003 aa20.09■□□□□ 0.81
SLX4-202ENST00000466154 MAP3K5Q99683 1374 aa20.09■□□□□ 0.81
SLX4-202ENST00000466154 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.81
SLX4-202ENST00000466154 REC8O95072 547 aa20.08■□□□□ 0.8
SLX4-202ENST00000466154 TEFQ10587 303 aa20.08■□□□□ 0.8
SLX4-202ENST00000466154 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.8
SLX4-202ENST00000466154 ERC2O15083 957 aa20.07■□□□□ 0.8
SLX4-202ENST00000466154 PKP1Q13835 747 aa20.07■□□□□ 0.8
SLX4-202ENST00000466154 KDRP35968 1356 aa20.07■□□□□ 0.8
SLX4-202ENST00000466154 SURF6O75683 361 aaKnown RBP20.07■□□□□ 0.8
SLX4-202ENST00000466154 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
SLX4-202ENST00000466154 ZGPATQ8N5A5 531 aaKnown RBP20.07■□□□□ 0.8
SLX4-202ENST00000466154 ST18O60284 1047 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 MX1P20591 662 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 NEK4P51957 841 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 TPRNQ4KMQ1 711 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
SLX4-202ENST00000466154 GOLGA6L22H0YM25 854 aa20.05■□□□□ 0.8
SLX4-202ENST00000466154 DDIT3P35638 169 aa20.05■□□□□ 0.8
SLX4-202ENST00000466154 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
SLX4-202ENST00000466154 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
SLX4-202ENST00000466154 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
SLX4-202ENST00000466154 CHAMP1Q96JM3 812 aa20.05■□□□□ 0.8
SLX4-202ENST00000466154 CIZ1Q9ULV3 898 aaPredicted RBP20.04■□□□□ 0.8
SLX4-202ENST00000466154 DDX49Q9Y6V7 483 aaKnown RBP20.04■□□□□ 0.8
SLX4-202ENST00000466154 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
SLX4-202ENST00000466154 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 BTBD11A6QL63 1104 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 ATP8B2P98198 1209 aa20.03■□□□□ 0.8
SLX4-202ENST00000466154 PPP1R42Q7Z4L9 355 aa20.02■□□□□ 0.8
SLX4-202ENST00000466154 UNC5CLQ8IV45 518 aa20.02■□□□□ 0.8
SLX4-202ENST00000466154 SRCIN1Q9C0H9 1055 aa20.02■□□□□ 0.8
SLX4-202ENST00000466154 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.79
SLX4-202ENST00000466154 NCOA3Q9Y6Q9 1424 aa20.01■□□□□ 0.79
SLX4-202ENST00000466154 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
SLX4-202ENST00000466154 UPF3BQ9BZI7 483 aaKnown RBP20.01■□□□□ 0.79
SLX4-202ENST00000466154 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
SLX4-202ENST00000466154 IP6K1Q92551 441 aa20.01■□□□□ 0.79
SLX4-202ENST00000466154 ZC3H6P61129 1189 aaKnown RBP20■□□□□ 0.79
SLX4-202ENST00000466154 GRPEL1Q9HAV7 217 aa20■□□□□ 0.79
SLX4-202ENST00000466154 PIK3C2AO00443 1686 aa20■□□□□ 0.79
SLX4-202ENST00000466154 BAG4O95429 457 aaKnown RBP20■□□□□ 0.79
SLX4-202ENST00000466154 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
SLX4-202ENST00000466154 AK9Q5TCS8 1911 aa20■□□□□ 0.79
SLX4-202ENST00000466154 PRAMEF22A3QJZ6 481 aa19.98■□□□□ 0.79
SLX4-202ENST00000466154 GAS2L3Q86XJ1 694 aa19.98■□□□□ 0.79
SLX4-202ENST00000466154 PALD1Q9ULE6 856 aa19.98■□□□□ 0.79
SLX4-202ENST00000466154 ESYT1Q9BSJ8 1104 aa19.98■□□□□ 0.79
SLX4-202ENST00000466154 ARHGAP23Q9P227 1491 aa19.97■□□□□ 0.79
SLX4-202ENST00000466154 SLIT1O75093 1534 aa19.97■□□□□ 0.79
SLX4-202ENST00000466154 EIF4A1P60842 406 aaKnown RBP19.97■□□□□ 0.79
SLX4-202ENST00000466154 LARP6Q9BRS8 491 aaKnown RBP19.97■□□□□ 0.79
SLX4-202ENST00000466154 RGPD1P0DJD0 1748 aa19.97■□□□□ 0.79
SLX4-202ENST00000466154 MRE11P49959 708 aa19.97■□□□□ 0.79
SLX4-202ENST00000466154 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
SLX4-202ENST00000466154 FSD2A1L4K1 749 aa19.96■□□□□ 0.79
SLX4-202ENST00000466154 GCP02774 474 aa19.96■□□□□ 0.79
SLX4-202ENST00000466154 MCCP23508 829 aa19.96■□□□□ 0.79
SLX4-202ENST00000466154 DNAAF4Q8WXU2 420 aa19.96■□□□□ 0.79
SLX4-202ENST00000466154 RRAGDQ9NQL2 400 aaPredicted RBP19.96■□□□□ 0.79
SLX4-202ENST00000466154 C9orf78Q9NZ63 289 aaPredicted RBP19.96■□□□□ 0.79
SLX4-202ENST00000466154 DTNBO60941 627 aa19.95■□□□□ 0.78
SLX4-202ENST00000466154 PLEKHO1Q53GL0 409 aaPredicted RBP19.95■□□□□ 0.78
SLX4-202ENST00000466154 CAVIN1Q6NZI2 390 aaKnown RBP19.95■□□□□ 0.78
SLX4-202ENST00000466154 PRPF40AO75400 957 aaKnown RBP19.95■□□□□ 0.78
SLX4-202ENST00000466154 CHMLP26374 656 aa19.95■□□□□ 0.78
SLX4-202ENST00000466154 FMN2Q9NZ56 1722 aa19.94■□□□□ 0.78
SLX4-202ENST00000466154 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
SLX4-202ENST00000466154 ANKRD24Q8TF21 1146 aa19.94■□□□□ 0.78
SLX4-202ENST00000466154 DDX17Q92841 729 aaKnown RBP19.94■□□□□ 0.78
SLX4-202ENST00000466154 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
SLX4-202ENST00000466154 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
SLX4-202ENST00000466154 NUCB2P80303 420 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
SLX4-202ENST00000466154 SKOR2Q2VWA4 1001 aaPredicted RBP19.93■□□□□ 0.78
SLX4-202ENST00000466154 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 IL25Q9H293 177 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
SLX4-202ENST00000466154 KCNH5Q8NCM2 988 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms