RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
VCP-204ENST00000466100 CICQ96RK0 1608 aaPredicted RBP14.58□□□□□ -0.08
VCP-204ENST00000466100 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
VCP-204ENST00000466100 CHL1O00533 1208 aa14.57□□□□□ -0.08
VCP-204ENST00000466100 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
VCP-204ENST00000466100 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
VCP-204ENST00000466100 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
VCP-204ENST00000466100 IFT57Q9NWB7 429 aa14.57□□□□□ -0.08
VCP-204ENST00000466100 LY75O60449 1722 aa14.57□□□□□ -0.08
VCP-204ENST00000466100 C5P01031 1676 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 ZNF831Q5JPB2 1677 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 TEFQ10587 303 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 NFATC2IPQ8NCF5 419 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 CDCA7LQ96GN5 454 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 BABAM1Q9NWV8 329 aa14.56□□□□□ -0.08
VCP-204ENST00000466100 RGPD3A6NKT7 1758 aaPredicted RBP14.55□□□□□ -0.08
VCP-204ENST00000466100 RGPD4Q7Z3J3 1758 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 PRIM1P49642 420 aaKnown RBP14.55□□□□□ -0.08
VCP-204ENST00000466100 CABP4P57796 275 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 SLFN5Q08AF3 891 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 TAF7Q15545 349 aaPredicted RBP14.55□□□□□ -0.08
VCP-204ENST00000466100 FAM196AQ6ZSG2 479 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 PIGBQ92521 554 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 ACSBG1Q96GR2 724 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 LAMB4A4D0S4 1761 aa14.55□□□□□ -0.08
VCP-204ENST00000466100 E9PSI1 815 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 KCNQ2O43526 872 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 GNAI1P63096 354 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 PTF1AQ7RTS3 328 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 MBIPQ9NS73 344 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 TJP1Q07157 1748 aa14.54□□□□□ -0.08
VCP-204ENST00000466100 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
VCP-204ENST00000466100 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
VCP-204ENST00000466100 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
VCP-204ENST00000466100 HEG1Q9ULI3 1381 aa14.52□□□□□ -0.08
VCP-204ENST00000466100 BTBD11A6QL63 1104 aa14.52□□□□□ -0.09
VCP-204ENST00000466100 TSPYL4Q9UJ04 414 aa14.52□□□□□ -0.09
VCP-204ENST00000466100 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.09
VCP-204ENST00000466100 COL5A3P25940 1745 aaPredicted RBP14.52□□□□□ -0.09
VCP-204ENST00000466100 KCNQ3O43525 872 aa14.51□□□□□ -0.09
VCP-204ENST00000466100 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
VCP-204ENST00000466100 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
VCP-204ENST00000466100 MYH16Q9H6N6 1097 aa14.51□□□□□ -0.09
VCP-204ENST00000466100 LAS1LQ9Y4W2 734 aaKnown RBP14.51□□□□□ -0.09
VCP-204ENST00000466100 SYTL4Q96C24 671 aaPredicted RBP14.5□□□□□ -0.09
VCP-204ENST00000466100 BCL11BQ9C0K0 894 aaPredicted RBP14.5□□□□□ -0.09
VCP-204ENST00000466100 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
VCP-204ENST00000466100 ASAP1Q9ULH1 1129 aa14.5□□□□□ -0.09
VCP-204ENST00000466100 EIF4A1P60842 406 aaKnown RBP14.49□□□□□ -0.09
VCP-204ENST00000466100 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
VCP-204ENST00000466100 RREB1Q92766 1687 aa14.49□□□□□ -0.09
VCP-204ENST00000466100 TRIM37O94972 964 aa14.48□□□□□ -0.09
VCP-204ENST00000466100 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
VCP-204ENST00000466100 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
VCP-204ENST00000466100 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
VCP-204ENST00000466100 MYH14Q7Z406 1995 aaKnown RBP14.46□□□□□ -0.09
VCP-204ENST00000466100 EXOSC9Q06265 439 aaKnown RBP14.46□□□□□ -0.09
VCP-204ENST00000466100 C8orf58Q8NAV2 365 aa14.46□□□□□ -0.09
VCP-204ENST00000466100 SLC4A9Q96Q91 983 aa14.46□□□□□ -0.09
VCP-204ENST00000466100 TTC5Q8N0Z6 440 aa14.45□□□□□ -0.1
VCP-204ENST00000466100 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
VCP-204ENST00000466100 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
VCP-204ENST00000466100 FMNL2Q96PY5 1086 aa14.45□□□□□ -0.1
VCP-204ENST00000466100 GIGYF1O75420 1035 aaPredicted RBP14.44□□□□□ -0.1
VCP-204ENST00000466100 SOS1Q07889 1333 aaPredicted RBP14.43□□□□□ -0.1
VCP-204ENST00000466100 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
VCP-204ENST00000466100 HOXB7P09629 217 aa14.43□□□□□ -0.1
VCP-204ENST00000466100 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
VCP-204ENST00000466100 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
VCP-204ENST00000466100 LOC102724428A0A0B4J2F2 783 aa14.42□□□□□ -0.1
VCP-204ENST00000466100 PRAMEF22A3QJZ6 481 aa14.42□□□□□ -0.1
VCP-204ENST00000466100 VAMP4O75379 141 aa14.42□□□□□ -0.1
VCP-204ENST00000466100 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
VCP-204ENST00000466100 SIK1P57059 783 aa14.42□□□□□ -0.1
VCP-204ENST00000466100 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
VCP-204ENST00000466100 PLSCR1O15162 318 aa14.41□□□□□ -0.1
VCP-204ENST00000466100 SNRPA1P09661 255 aaKnown RBP14.41□□□□□ -0.1
VCP-204ENST00000466100 TWISTNBQ3B726 338 aaPredicted RBP14.41□□□□□ -0.1
VCP-204ENST00000466100 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
VCP-204ENST00000466100 TUBGCP6Q96RT7 1819 aa14.41□□□□□ -0.1
VCP-204ENST00000466100 ITPK1Q13572 414 aa14.4□□□□□ -0.1
VCP-204ENST00000466100 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
VCP-204ENST00000466100 UBR3Q6ZT12 1888 aa14.4□□□□□ -0.1
VCP-204ENST00000466100 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
VCP-204ENST00000466100 APBA3O96018 575 aa14.39□□□□□ -0.11
VCP-204ENST00000466100 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
VCP-204ENST00000466100 PROM2Q8N271 834 aa14.38□□□□□ -0.11
VCP-204ENST00000466100 ZNF428Q96B54 188 aa14.38□□□□□ -0.11
VCP-204ENST00000466100 LRRC4BQ9NT99 713 aa14.38□□□□□ -0.11
VCP-204ENST00000466100 USP16Q9Y5T5 823 aa14.38□□□□□ -0.11
VCP-204ENST00000466100 CYP19A1P11511 503 aaPredicted RBP14.37□□□□□ -0.11
VCP-204ENST00000466100 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
VCP-204ENST00000466100 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
VCP-204ENST00000466100 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
VCP-204ENST00000466100 QSER1Q2KHR3 1735 aa14.37□□□□□ -0.11
VCP-204ENST00000466100 C4AP0C0L4 1744 aa14.36□□□□□ -0.11
VCP-204ENST00000466100 RARSP54136 660 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms