RNA–Protein interactions for RNA: ENST00000466076.1

BCR-208, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene BCR, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-208ENST00000466076 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
BCR-208ENST00000466076 NHSQ6T4R5 1651 aa20.76■□□□□ 0.91
BCR-208ENST00000466076 ACSBG1Q96GR2 724 aa20.75■□□□□ 0.91
BCR-208ENST00000466076 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
BCR-208ENST00000466076 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
BCR-208ENST00000466076 ITGB4P16144 1822 aa20.74■□□□□ 0.91
BCR-208ENST00000466076 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
BCR-208ENST00000466076 SBF2Q86WG5 1849 aa20.74■□□□□ 0.91
BCR-208ENST00000466076 BTBD11A6QL63 1104 aa20.73■□□□□ 0.91
BCR-208ENST00000466076 E9PSI1 815 aa20.73■□□□□ 0.91
BCR-208ENST00000466076 PIGBQ92521 554 aa20.73■□□□□ 0.91
BCR-208ENST00000466076 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
BCR-208ENST00000466076 CHL1O00533 1208 aa20.72■□□□□ 0.91
BCR-208ENST00000466076 ZNF853P0CG23 659 aa20.72■□□□□ 0.91
BCR-208ENST00000466076 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
BCR-208ENST00000466076 KAT6BQ8WYB5 2073 aa20.72■□□□□ 0.91
BCR-208ENST00000466076 LAS1LQ9Y4W2 734 aaKnown RBP20.71■□□□□ 0.91
BCR-208ENST00000466076 KCNQ2O43526 872 aa20.7■□□□□ 0.9
BCR-208ENST00000466076 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.9
BCR-208ENST00000466076 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
BCR-208ENST00000466076 TRIM37O94972 964 aa20.68■□□□□ 0.9
BCR-208ENST00000466076 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
BCR-208ENST00000466076 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
BCR-208ENST00000466076 PAPPAQ13219 1627 aa20.67■□□□□ 0.9
BCR-208ENST00000466076 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
BCR-208ENST00000466076 MBIPQ9NS73 344 aa20.67■□□□□ 0.9
BCR-208ENST00000466076 EP400Q96L91 3159 aa20.67■□□□□ 0.9
BCR-208ENST00000466076 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
BCR-208ENST00000466076 BTAF1O14981 1849 aa20.66■□□□□ 0.9
BCR-208ENST00000466076 FANCIQ9NVI1 1328 aa20.65■□□□□ 0.9
BCR-208ENST00000466076 CCDC125Q86Z20 511 aa20.65■□□□□ 0.9
BCR-208ENST00000466076 MIS18AQ9NYP9 233 aa20.65■□□□□ 0.9
BCR-208ENST00000466076 ASAP1Q9ULH1 1129 aa20.65■□□□□ 0.9
BCR-208ENST00000466076 SLC39A6Q13433 755 aa20.64■□□□□ 0.89
BCR-208ENST00000466076 TRMT2AQ8IZ69 625 aaKnown RBP20.64■□□□□ 0.89
BCR-208ENST00000466076 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
BCR-208ENST00000466076 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
BCR-208ENST00000466076 PALLDQ8WX93 1383 aa20.63■□□□□ 0.89
BCR-208ENST00000466076 HMGB2P26583 209 aaKnown RBP20.63■□□□□ 0.89
BCR-208ENST00000466076 SF3B2Q13435 895 aaKnown RBP20.63■□□□□ 0.89
BCR-208ENST00000466076 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
BCR-208ENST00000466076 UBR2Q8IWV8 1755 aa20.62■□□□□ 0.89
BCR-208ENST00000466076 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
BCR-208ENST00000466076 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
BCR-208ENST00000466076 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
BCR-208ENST00000466076 VSIG10Q8N0Z9 540 aa20.62■□□□□ 0.89
BCR-208ENST00000466076 TSR2Q969E8 191 aaKnown RBP20.62■□□□□ 0.89
BCR-208ENST00000466076 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
BCR-208ENST00000466076 PLSCR1O15162 318 aa20.61■□□□□ 0.89
BCR-208ENST00000466076 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
BCR-208ENST00000466076 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
BCR-208ENST00000466076 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
BCR-208ENST00000466076 KCNQ3O43525 872 aa20.6■□□□□ 0.89
BCR-208ENST00000466076 APBA3O96018 575 aa20.6■□□□□ 0.89
BCR-208ENST00000466076 HOXB7P09629 217 aa20.6■□□□□ 0.89
BCR-208ENST00000466076 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
BCR-208ENST00000466076 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
BCR-208ENST00000466076 RBM42Q9BTD8 480 aaKnown RBP20.59■□□□□ 0.89
BCR-208ENST00000466076 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
BCR-208ENST00000466076 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.89
BCR-208ENST00000466076 LOC102724428A0A0B4J2F2 783 aa20.58■□□□□ 0.89
BCR-208ENST00000466076 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
BCR-208ENST00000466076 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
BCR-208ENST00000466076 CT47B1P0C2W7 299 aaPredicted RBP20.58■□□□□ 0.89
BCR-208ENST00000466076 SIK1P57059 783 aa20.58■□□□□ 0.89
BCR-208ENST00000466076 RGPD3A6NKT7 1758 aaPredicted RBP20.58■□□□□ 0.89
BCR-208ENST00000466076 RGPD4Q7Z3J3 1758 aa20.58■□□□□ 0.89
BCR-208ENST00000466076 LY75O60449 1722 aa20.57■□□□□ 0.88
BCR-208ENST00000466076 BAG6P46379 1132 aa20.57■□□□□ 0.88
BCR-208ENST00000466076 SLC27A3Q5K4L6 730 aa20.57■□□□□ 0.88
BCR-208ENST00000466076 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
BCR-208ENST00000466076 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
BCR-208ENST00000466076 CICQ96RK0 1608 aaPredicted RBP20.56■□□□□ 0.88
BCR-208ENST00000466076 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
BCR-208ENST00000466076 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
BCR-208ENST00000466076 ILDR2Q71H61 639 aa20.54■□□□□ 0.88
BCR-208ENST00000466076 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
BCR-208ENST00000466076 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
BCR-208ENST00000466076 CCNL1Q9UK58 526 aaPredicted RBP20.54■□□□□ 0.88
BCR-208ENST00000466076 STARD3NLO95772 234 aa20.53■□□□□ 0.88
BCR-208ENST00000466076 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
BCR-208ENST00000466076 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
BCR-208ENST00000466076 UPF1Q92900 1129 aaKnown RBP eCLIP20.51■□□□□ 0.87
BCR-208ENST00000466076 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
BCR-208ENST00000466076 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
BCR-208ENST00000466076 VAMP4O75379 141 aa20.5■□□□□ 0.87
BCR-208ENST00000466076 DNAJC10Q8IXB1 793 aa20.5■□□□□ 0.87
BCR-208ENST00000466076 TSPYL6Q8N831 410 aa20.5■□□□□ 0.87
BCR-208ENST00000466076 ERBB4Q15303 1308 aa20.5■□□□□ 0.87
BCR-208ENST00000466076 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
BCR-208ENST00000466076 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
BCR-208ENST00000466076 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
BCR-208ENST00000466076 CAMKK2Q96RR4 588 aa20.49■□□□□ 0.87
BCR-208ENST00000466076 TJP1Q07157 1748 aa20.49■□□□□ 0.87
BCR-208ENST00000466076 C5P01031 1676 aa20.48■□□□□ 0.87
BCR-208ENST00000466076 EN1Q05925 392 aaPredicted RBP20.48■□□□□ 0.87
BCR-208ENST00000466076 CYP19A1P11511 503 aaPredicted RBP20.47■□□□□ 0.87
BCR-208ENST00000466076 ITPK1Q13572 414 aa20.47■□□□□ 0.87
BCR-208ENST00000466076 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
BCR-208ENST00000466076 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms