RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 POTECB2RU33 542 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 KIF3BO15066 747 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 ST8SIA5O15466 376 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 WNT7BP56706 349 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 TRAF7Q6Q0C0 670 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
VPS41-211ENST00000466017 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 UNC13BO14795 1591 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 FRMPD1Q5SYB0 1578 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 ANKRD30BQ9BXX2 1392 aa7.95□□□□□ -1.14
VPS41-211ENST00000466017 SNRKQ9NRH2 765 aa7.94□□□□□ -1.14
VPS41-211ENST00000466017 TLL2Q9Y6L7 1015 aa7.94□□□□□ -1.14
VPS41-211ENST00000466017 KANK1Q14678 1352 aa7.94□□□□□ -1.14
VPS41-211ENST00000466017 VWDEQ8N2E2 1590 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 DEPDC5O75140 1603 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 CYP4X1Q8N118 509 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 HPS1Q92902 700 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 DIP2CQ9Y2E4 1556 aa7.93□□□□□ -1.14
VPS41-211ENST00000466017 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
VPS41-211ENST00000466017 LAPTM4AQ15012 233 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 EHBP1Q8NDI1 1231 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
VPS41-211ENST00000466017 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
VPS41-211ENST00000466017 YEATS2Q9ULM3 1422 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 FAM135AQ9P2D6 1515 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 IQGAP3Q86VI3 1631 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 ABCA6Q8N139 1617 aa7.92□□□□□ -1.14
VPS41-211ENST00000466017 ALDH1A1P00352 501 aa7.91□□□□□ -1.14
VPS41-211ENST00000466017 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
VPS41-211ENST00000466017 RNF17Q9BXT8 1623 aaKnown RBP7.91□□□□□ -1.14
VPS41-211ENST00000466017 PRDM15P57071 1507 aaPredicted RBP7.9□□□□□ -1.14
VPS41-211ENST00000466017 PTPRTO14522 1441 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 ARHGAP31Q2M1Z3 1444 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 GPR37L1O60883 481 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 DGAT1O75907 488 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 PKDCCQ504Y2 493 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 SH3BP5LQ7L8J4 393 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 SIN3AQ96ST3 1273 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 AAASQ9NRG9 546 aa7.9□□□□□ -1.14
VPS41-211ENST00000466017 RPRD2Q5VT52 1461 aaKnown RBP7.89□□□□□ -1.15
VPS41-211ENST00000466017 MROH1Q8NDA8 1641 aa7.89□□□□□ -1.15
VPS41-211ENST00000466017 PPP1R15AO75807 674 aaPredicted RBP7.88□□□□□ -1.15
VPS41-211ENST00000466017 AVPP01185 164 aa7.88□□□□□ -1.15
VPS41-211ENST00000466017 GGT6Q6P531 493 aa7.88□□□□□ -1.15
VPS41-211ENST00000466017 MTMR14Q8NCE2 650 aa7.88□□□□□ -1.15
VPS41-211ENST00000466017 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
VPS41-211ENST00000466017 ARHGEF40Q8TER5 1519 aa7.88□□□□□ -1.15
VPS41-211ENST00000466017 WASHC2CQ9Y4E1 1318 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 TET3O43151 1660 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 GRM5P41594 1212 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 TMEM259Q4ZIN3 620 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 PLA2R1Q13018 1463 aa7.87□□□□□ -1.15
VPS41-211ENST00000466017 NEURL4Q96JN8 1562 aa7.86□□□□□ -1.15
VPS41-211ENST00000466017 MAGEB6P1A0A0J9YX57 407 aa7.86□□□□□ -1.15
VPS41-211ENST00000466017 VARSP26640 1264 aaKnown RBP7.86□□□□□ -1.15
VPS41-211ENST00000466017 AGERQ15109 404 aa7.86□□□□□ -1.15
VPS41-211ENST00000466017 NR3C2P08235 984 aa7.85□□□□□ -1.15
VPS41-211ENST00000466017 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
VPS41-211ENST00000466017 ARID5BQ14865 1188 aa7.85□□□□□ -1.15
VPS41-211ENST00000466017 C1QTNF2Q9BXJ5 285 aa7.85□□□□□ -1.15
VPS41-211ENST00000466017 ZC3H13Q5T200 1668 aaKnown RBP7.85□□□□□ -1.15
VPS41-211ENST00000466017 NOS1P29475 1434 aa7.85□□□□□ -1.15
VPS41-211ENST00000466017 ABCC3O15438 1527 aa7.84□□□□□ -1.15
VPS41-211ENST00000466017 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
VPS41-211ENST00000466017 SLC52A1Q9NWF4 448 aa7.84□□□□□ -1.15
VPS41-211ENST00000466017 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.15
VPS41-211ENST00000466017 TONSLQ96HA7 1378 aa7.84□□□□□ -1.16
VPS41-211ENST00000466017 EFCAB6Q5THR3 1501 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 BPHLQ86WA6 291 aaPredicted RBP7.83□□□□□ -1.16
VPS41-211ENST00000466017 L3MBTL2Q969R5 705 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 CDK15Q96Q40 435 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 KLF16Q9BXK1 252 aaPredicted RBP7.83□□□□□ -1.16
VPS41-211ENST00000466017 CCDC144AA2RUR9 1427 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 NPATQ14207 1427 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 E9PCH4 1651 aa7.83□□□□□ -1.16
VPS41-211ENST00000466017 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
VPS41-211ENST00000466017 TRPM2O94759 1503 aa7.82□□□□□ -1.16
VPS41-211ENST00000466017 NNTQ13423 1086 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 BANK1Q8NDB2 785 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 FAM174AQ8TBP5 190 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 ADAM32Q8TC27 787 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 ARHGAP9Q9BRR9 750 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 ZMYM3Q14202 1370 aa7.81□□□□□ -1.16
VPS41-211ENST00000466017 RPGRIP1LQ68CZ1 1315 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 UHRF1BP1Q6BDS2 1440 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 SPATA31E1Q6ZUB1 1445 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 AXIN1O15169 862 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 NBPF14Q5TI25 921 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 CRIPAKQ8N1N5 446 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 MPNDQ8N594 471 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
VPS41-211ENST00000466017 ZFAND3Q9H8U3 227 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 GMPR2Q9P2T1 348 aaKnown RBP7.8□□□□□ -1.16
VPS41-211ENST00000466017 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
VPS41-211ENST00000466017 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
VPS41-211ENST00000466017 CAMSAP1Q5T5Y3 1602 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms