RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
NPHP3-203ENST00000465756 PIGBQ92521 554 aa14.12□□□□□ -0.15
NPHP3-203ENST00000465756 MTFR1LQ9H019 292 aa14.12□□□□□ -0.15
NPHP3-203ENST00000465756 RGPD2P0DJD1 1756 aa14.12□□□□□ -0.15
NPHP3-203ENST00000465756 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
NPHP3-203ENST00000465756 NFE2L2Q16236 605 aa14.12□□□□□ -0.15
NPHP3-203ENST00000465756 RUNDC1Q96C34 613 aa14.12□□□□□ -0.15
NPHP3-203ENST00000465756 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
NPHP3-203ENST00000465756 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
NPHP3-203ENST00000465756 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
NPHP3-203ENST00000465756 DOT1LQ8TEK3 1739 aa14.11□□□□□ -0.15
NPHP3-203ENST00000465756 SBF2Q86WG5 1849 aa14.1□□□□□ -0.15
NPHP3-203ENST00000465756 SSFA2P28290 1259 aa14.1□□□□□ -0.15
NPHP3-203ENST00000465756 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
NPHP3-203ENST00000465756 VSIG10Q8N0Z9 540 aa14.1□□□□□ -0.15
NPHP3-203ENST00000465756 MRS2Q9HD23 443 aa14.1□□□□□ -0.15
NPHP3-203ENST00000465756 BTAF1O14981 1849 aa14.09□□□□□ -0.15
NPHP3-203ENST00000465756 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
NPHP3-203ENST00000465756 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
NPHP3-203ENST00000465756 TRAPPC3LQ5T215 181 aa14.08□□□□□ -0.16
NPHP3-203ENST00000465756 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
NPHP3-203ENST00000465756 COL3A1P02461 1466 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-203ENST00000465756 RFC4P35249 363 aa14.07□□□□□ -0.16
NPHP3-203ENST00000465756 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
NPHP3-203ENST00000465756 GNPATO15228 680 aa14.07□□□□□ -0.16
NPHP3-203ENST00000465756 PTCD1O75127 700 aaKnown RBP14.07□□□□□ -0.16
NPHP3-203ENST00000465756 ATG3Q9NT62 314 aa14.07□□□□□ -0.16
NPHP3-203ENST00000465756 CNTNAP4Q9C0A0 1308 aa14.06□□□□□ -0.16
NPHP3-203ENST00000465756 RREB1Q92766 1687 aa14.06□□□□□ -0.16
NPHP3-203ENST00000465756 ZPR1O75312 459 aa14.06□□□□□ -0.16
NPHP3-203ENST00000465756 RIPK4P57078 832 aa14.05□□□□□ -0.16
NPHP3-203ENST00000465756 NLGN1Q8N2Q7 840 aa14.05□□□□□ -0.16
NPHP3-203ENST00000465756 ASAP1Q9ULH1 1129 aa14.05□□□□□ -0.16
NPHP3-203ENST00000465756 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
NPHP3-203ENST00000465756 NPHP1O15259 732 aa14.04□□□□□ -0.16
NPHP3-203ENST00000465756 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
NPHP3-203ENST00000465756 ZNF652Q9Y2D9 606 aa14.04□□□□□ -0.16
NPHP3-203ENST00000465756 SNRPA1P09661 255 aaKnown RBP14.03□□□□□ -0.16
NPHP3-203ENST00000465756 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
NPHP3-203ENST00000465756 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
NPHP3-203ENST00000465756 ARXQ96QS3 562 aa14.02□□□□□ -0.16
NPHP3-203ENST00000465756 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.16
NPHP3-203ENST00000465756 KDM6AO15550 1401 aaPredicted RBP14.02□□□□□ -0.16
NPHP3-203ENST00000465756 ZNF790Q6PG37 636 aa14.02□□□□□ -0.17
NPHP3-203ENST00000465756 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.17
NPHP3-203ENST00000465756 PHF14O94880 888 aa14.01□□□□□ -0.17
NPHP3-203ENST00000465756 ZBTB7AO95365 584 aa14.01□□□□□ -0.17
NPHP3-203ENST00000465756 PARP3Q9Y6F1 533 aa14.01□□□□□ -0.17
NPHP3-203ENST00000465756 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-203ENST00000465756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
NPHP3-203ENST00000465756 PROM2Q8N271 834 aa14.01□□□□□ -0.17
NPHP3-203ENST00000465756 LGR6Q9HBX8 967 aa14.01□□□□□ -0.17
NPHP3-203ENST00000465756 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-203ENST00000465756 TMPOP42166 694 aaKnown RBP14□□□□□ -0.17
NPHP3-203ENST00000465756 GNAI1P63096 354 aa14□□□□□ -0.17
NPHP3-203ENST00000465756 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
NPHP3-203ENST00000465756 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 SHANK3Q9BYB0 1731 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 ERBB4Q15303 1308 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
NPHP3-203ENST00000465756 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 MRC1P22897 1456 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
NPHP3-203ENST00000465756 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-203ENST00000465756 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
NPHP3-203ENST00000465756 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 LRP5O75197 1615 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 ITGB4P16144 1822 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 ZNF827Q17R98 1081 aa13.98□□□□□ -0.17
NPHP3-203ENST00000465756 MCM10Q7L590 875 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
NPHP3-203ENST00000465756 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 CEMIPQ8WUJ3 1361 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
NPHP3-203ENST00000465756 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 LY75O60449 1722 aa13.97□□□□□ -0.17
NPHP3-203ENST00000465756 LINC00116Q8NCU8 138 aa13.96□□□□□ -0.17
NPHP3-203ENST00000465756 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-203ENST00000465756 RGL2O15211 777 aa13.96□□□□□ -0.18
NPHP3-203ENST00000465756 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.18
NPHP3-203ENST00000465756 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.18
NPHP3-203ENST00000465756 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
NPHP3-203ENST00000465756 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
NPHP3-203ENST00000465756 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
NPHP3-203ENST00000465756 ITPK1Q13572 414 aa13.94□□□□□ -0.18
NPHP3-203ENST00000465756 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
NPHP3-203ENST00000465756 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
NPHP3-203ENST00000465756 HOXB7P09629 217 aa13.94□□□□□ -0.18
NPHP3-203ENST00000465756 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
NPHP3-203ENST00000465756 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
NPHP3-203ENST00000465756 HSP90AB3PQ58FF7 597 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 GRIN3BO60391 1043 aa13.93□□□□□ -0.18
NPHP3-203ENST00000465756 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-203ENST00000465756 KCNQ4P56696 695 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms