RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 HTRA3P83110 453 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 IP6K1Q92551 441 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
UBA3-208ENST00000465627 APAF1O14727 1248 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
UBA3-208ENST00000465627 FCHSD2O94868 740 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
UBA3-208ENST00000465627 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBA3-208ENST00000465627 FKBP8Q14318 412 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 FAM196AQ6ZSG2 479 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 NGEFQ8N5V2 710 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 JMYQ8N9B5 988 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
UBA3-208ENST00000465627 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
UBA3-208ENST00000465627 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
UBA3-208ENST00000465627 SOX12O15370 315 aa11.67□□□□□ -0.54
UBA3-208ENST00000465627 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
UBA3-208ENST00000465627 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
UBA3-208ENST00000465627 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
UBA3-208ENST00000465627 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
UBA3-208ENST00000465627 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
UBA3-208ENST00000465627 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
UBA3-208ENST00000465627 POTEJP0CG39 1038 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 AMPHP49418 695 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 PDE3BQ13370 1112 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.55
UBA3-208ENST00000465627 ARXQ96QS3 562 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.55
UBA3-208ENST00000465627 FAM208AQ9UK61 1670 aaKnown RBP11.65□□□□□ -0.55
UBA3-208ENST00000465627 MAP3K5Q99683 1374 aa11.64□□□□□ -0.55
UBA3-208ENST00000465627 KIF3CO14782 793 aa11.64□□□□□ -0.55
UBA3-208ENST00000465627 NUBP1P53384 320 aa11.64□□□□□ -0.55
UBA3-208ENST00000465627 PHACTR3Q96KR7 559 aa11.64□□□□□ -0.55
UBA3-208ENST00000465627 EYA1Q99502 592 aa11.64□□□□□ -0.55
UBA3-208ENST00000465627 HMOX1P09601 288 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 YBX3P16989 372 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBA3-208ENST00000465627 PRKAR2BP31323 418 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 TMPOP42166 694 aaKnown RBP11.63□□□□□ -0.55
UBA3-208ENST00000465627 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
UBA3-208ENST00000465627 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 KIAA0232Q92628 1395 aa11.63□□□□□ -0.55
UBA3-208ENST00000465627 POTEMA6NI47 508 aa11.62□□□□□ -0.55
UBA3-208ENST00000465627 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
UBA3-208ENST00000465627 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
UBA3-208ENST00000465627 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
UBA3-208ENST00000465627 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
UBA3-208ENST00000465627 BTG4Q9NY30 223 aa11.61□□□□□ -0.55
UBA3-208ENST00000465627 ERBB3P21860 1342 aa11.61□□□□□ -0.55
UBA3-208ENST00000465627 ADCY9O60503 1353 aa11.61□□□□□ -0.55
UBA3-208ENST00000465627 RGPD3A6NKT7 1758 aaPredicted RBP11.6□□□□□ -0.55
UBA3-208ENST00000465627 RGPD4Q7Z3J3 1758 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
UBA3-208ENST00000465627 SLFN5Q08AF3 891 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 NBPF6Q5VWK0 638 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 DUSP27Q5VZP5 1158 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 NBPF4Q96M43 638 aa11.6□□□□□ -0.55
UBA3-208ENST00000465627 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
UBA3-208ENST00000465627 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
UBA3-208ENST00000465627 SEC24BO95487 1268 aa11.59□□□□□ -0.55
UBA3-208ENST00000465627 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
UBA3-208ENST00000465627 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
UBA3-208ENST00000465627 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
UBA3-208ENST00000465627 LRRC37A3O60309 1634 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.56
UBA3-208ENST00000465627 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
UBA3-208ENST00000465627 COL14A1Q05707 1796 aaKnown RBP11.58□□□□□ -0.56
UBA3-208ENST00000465627 PLEKHG2Q9H7P9 1386 aa11.57□□□□□ -0.56
UBA3-208ENST00000465627 MAPK8IP3Q9UPT6 1336 aa11.57□□□□□ -0.56
UBA3-208ENST00000465627 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
UBA3-208ENST00000465627 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
UBA3-208ENST00000465627 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
UBA3-208ENST00000465627 SBF2Q86WG5 1849 aa11.57□□□□□ -0.56
UBA3-208ENST00000465627 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
UBA3-208ENST00000465627 IL16Q14005 1332 aa11.56□□□□□ -0.56
UBA3-208ENST00000465627 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
UBA3-208ENST00000465627 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
UBA3-208ENST00000465627 PKD1L3Q7Z443 1732 aa11.56□□□□□ -0.56
UBA3-208ENST00000465627 E9PSI1 815 aa11.55□□□□□ -0.56
UBA3-208ENST00000465627 RIPK4P57078 832 aa11.55□□□□□ -0.56
UBA3-208ENST00000465627 IER5LQ5T953 404 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms