RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 R3HDM1Q15032 1099 aaKnown RBP16.4■□□□□ 0.22
CHPF2-202ENST00000465601 SLC27A3Q5K4L6 730 aa16.4■□□□□ 0.22
CHPF2-202ENST00000465601 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CHPF2-202ENST00000465601 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
CHPF2-202ENST00000465601 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
CHPF2-202ENST00000465601 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
CHPF2-202ENST00000465601 ADAMTS7Q9UKP4 1686 aa16.38■□□□□ 0.21
CHPF2-202ENST00000465601 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
CHPF2-202ENST00000465601 MCM10Q7L590 875 aa16.38■□□□□ 0.21
CHPF2-202ENST00000465601 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 SIK1P57059 783 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 TEFQ10587 303 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
CHPF2-202ENST00000465601 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
CHPF2-202ENST00000465601 HTATSF1O43719 755 aaKnown RBP16.36■□□□□ 0.21
CHPF2-202ENST00000465601 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
CHPF2-202ENST00000465601 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
CHPF2-202ENST00000465601 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
CHPF2-202ENST00000465601 RIPK4P57078 832 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
CHPF2-202ENST00000465601 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 MRC1P22897 1456 aa16.35■□□□□ 0.21
CHPF2-202ENST00000465601 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
CHPF2-202ENST00000465601 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
CHPF2-202ENST00000465601 SLC4A9Q96Q91 983 aa16.34■□□□□ 0.21
CHPF2-202ENST00000465601 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
CHPF2-202ENST00000465601 ITPK1Q13572 414 aa16.33■□□□□ 0.2
CHPF2-202ENST00000465601 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
CHPF2-202ENST00000465601 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
CHPF2-202ENST00000465601 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
CHPF2-202ENST00000465601 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
CHPF2-202ENST00000465601 C5P01031 1676 aa16.31■□□□□ 0.2
CHPF2-202ENST00000465601 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
CHPF2-202ENST00000465601 APAF1O14727 1248 aa16.31■□□□□ 0.2
CHPF2-202ENST00000465601 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
CHPF2-202ENST00000465601 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
CHPF2-202ENST00000465601 KCNQ3O43525 872 aa16.3■□□□□ 0.2
CHPF2-202ENST00000465601 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-202ENST00000465601 TTC5Q8N0Z6 440 aa16.3■□□□□ 0.2
CHPF2-202ENST00000465601 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-202ENST00000465601 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
CHPF2-202ENST00000465601 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
CHPF2-202ENST00000465601 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
CHPF2-202ENST00000465601 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
CHPF2-202ENST00000465601 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
CHPF2-202ENST00000465601 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
CHPF2-202ENST00000465601 MYH14Q7Z406 1995 aaKnown RBP16.28■□□□□ 0.2
CHPF2-202ENST00000465601 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
CHPF2-202ENST00000465601 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
CHPF2-202ENST00000465601 TUBGCP6Q96RT7 1819 aa16.28■□□□□ 0.2
CHPF2-202ENST00000465601 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
CHPF2-202ENST00000465601 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
CHPF2-202ENST00000465601 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
CHPF2-202ENST00000465601 AK7Q96M32 723 aa16.27■□□□□ 0.2
CHPF2-202ENST00000465601 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
CHPF2-202ENST00000465601 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
CHPF2-202ENST00000465601 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
CHPF2-202ENST00000465601 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
CHPF2-202ENST00000465601 PNPLA7Q6ZV29 1317 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 MIER1Q8N108 512 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 TJP1Q07157 1748 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
CHPF2-202ENST00000465601 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 GNPATO15228 680 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 MSH5O43196 834 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
CHPF2-202ENST00000465601 COL23A1Q86Y22 540 aaPredicted RBP16.24■□□□□ 0.19
CHPF2-202ENST00000465601 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
CHPF2-202ENST00000465601 QSER1Q2KHR3 1735 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
CHPF2-202ENST00000465601 CASZ1Q86V15 1759 aa16.23■□□□□ 0.19
CHPF2-202ENST00000465601 PHF14O94880 888 aa16.23■□□□□ 0.19
CHPF2-202ENST00000465601 CRKLP46109 303 aaKnown RBP16.23■□□□□ 0.19
CHPF2-202ENST00000465601 CNTNAP4Q9C0A0 1308 aa16.22■□□□□ 0.19
CHPF2-202ENST00000465601 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
CHPF2-202ENST00000465601 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
CHPF2-202ENST00000465601 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
CHPF2-202ENST00000465601 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
CHPF2-202ENST00000465601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
CHPF2-202ENST00000465601 RPS6KA4O75676 772 aa16.21■□□□□ 0.19
CHPF2-202ENST00000465601 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
CHPF2-202ENST00000465601 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
CHPF2-202ENST00000465601 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.19
CHPF2-202ENST00000465601 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
CHPF2-202ENST00000465601 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
CHPF2-202ENST00000465601 STARD3NLO95772 234 aa16.2■□□□□ 0.18
CHPF2-202ENST00000465601 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
CHPF2-202ENST00000465601 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
CHPF2-202ENST00000465601 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
CHPF2-202ENST00000465601 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
CHPF2-202ENST00000465601 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms