RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 IFNL2Q8IZJ0 200 aa13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
CTNNB1-211ENST00000465552 KCNQ4P56696 695 aa13.35□□□□□ -0.27
CTNNB1-211ENST00000465552 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
CTNNB1-211ENST00000465552 PROM2Q8N271 834 aa13.35□□□□□ -0.27
CTNNB1-211ENST00000465552 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
CTNNB1-211ENST00000465552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.272e-14■□□□□ 8.3
CTNNB1-211ENST00000465552 MYH14Q7Z406 1995 aaKnown RBP13.33□□□□□ -0.28
CTNNB1-211ENST00000465552 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
CTNNB1-211ENST00000465552 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
CTNNB1-211ENST00000465552 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
CTNNB1-211ENST00000465552 C4AP0C0L4 1744 aa13.33□□□□□ -0.28
CTNNB1-211ENST00000465552 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
CTNNB1-211ENST00000465552 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
CTNNB1-211ENST00000465552 AMOTQ4VCS5 1084 aa13.32□□□□□ -0.28
CTNNB1-211ENST00000465552 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
CTNNB1-211ENST00000465552 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
CTNNB1-211ENST00000465552 MRC1P22897 1456 aa13.31□□□□□ -0.28
CTNNB1-211ENST00000465552 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
CTNNB1-211ENST00000465552 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 U2AF1L5P0DN76 240 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.286e-7■□□□□ 9.8
CTNNB1-211ENST00000465552 U2AF1Q01081 240 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 PIGBQ92521 554 aa13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
CTNNB1-211ENST00000465552 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
CTNNB1-211ENST00000465552 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
CTNNB1-211ENST00000465552 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
CTNNB1-211ENST00000465552 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
CTNNB1-211ENST00000465552 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
CTNNB1-211ENST00000465552 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
CTNNB1-211ENST00000465552 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-211ENST00000465552 RALBP1Q15311 655 aa13.28□□□□□ -0.28
CTNNB1-211ENST00000465552 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
CTNNB1-211ENST00000465552 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
CTNNB1-211ENST00000465552 CABP4P57796 275 aa13.27□□□□□ -0.29
CTNNB1-211ENST00000465552 SLC15A2Q16348 729 aa13.27□□□□□ -0.29
CTNNB1-211ENST00000465552 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
CTNNB1-211ENST00000465552 ASAP1Q9ULH1 1129 aa13.27□□□□□ -0.29
CTNNB1-211ENST00000465552 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
CTNNB1-211ENST00000465552 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
CTNNB1-211ENST00000465552 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
CTNNB1-211ENST00000465552 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
CTNNB1-211ENST00000465552 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
CTNNB1-211ENST00000465552 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
CTNNB1-211ENST00000465552 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
CTNNB1-211ENST00000465552 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
CTNNB1-211ENST00000465552 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
CTNNB1-211ENST00000465552 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-211ENST00000465552 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
CTNNB1-211ENST00000465552 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
CTNNB1-211ENST00000465552 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
CTNNB1-211ENST00000465552 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
CTNNB1-211ENST00000465552 PNPLA7Q6ZV29 1317 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 GNAT3A8MTJ3 354 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 SIK1P57059 783 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
CTNNB1-211ENST00000465552 PTCD1O75127 700 aaKnown RBP13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 FCHSD2O94868 740 aa13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 ITPK1Q13572 414 aa13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
CTNNB1-211ENST00000465552 PHF14O94880 888 aa13.2□□□□□ -0.3
CTNNB1-211ENST00000465552 AK7Q96M32 723 aa13.2□□□□□ -0.3
CTNNB1-211ENST00000465552 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
CTNNB1-211ENST00000465552 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 NEFMP07197 916 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 TEFQ10587 303 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 MCM10Q7L590 875 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
CTNNB1-211ENST00000465552 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
CTNNB1-211ENST00000465552 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
CTNNB1-211ENST00000465552 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
CTNNB1-211ENST00000465552 PPP1R1BQ9UD71 204 aaPredicted RBP13.17□□□□□ -0.3
CTNNB1-211ENST00000465552 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
CTNNB1-211ENST00000465552 SCN7AQ01118 1682 aa13.17□□□□□ -0.3
CTNNB1-211ENST00000465552 GNPATO15228 680 aa13.16□□□□□ -0.3
CTNNB1-211ENST00000465552 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
CTNNB1-211ENST00000465552 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms