RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-212ENST00000465298 EZH2Q15910 746 aaKnown RBP17.27■□□□□ 0.36
ERGIC3-212ENST00000465298 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-212ENST00000465298 MRC1P22897 1456 aa17.26■□□□□ 0.35
ERGIC3-212ENST00000465298 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
ERGIC3-212ENST00000465298 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 APAF1O14727 1248 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
ERGIC3-212ENST00000465298 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 SIK1P57059 783 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 ZNF790Q6PG37 636 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 MCM10Q7L590 875 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 BTAF1O14981 1849 aa17.24■□□□□ 0.35
ERGIC3-212ENST00000465298 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
ERGIC3-212ENST00000465298 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
ERGIC3-212ENST00000465298 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
ERGIC3-212ENST00000465298 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
ERGIC3-212ENST00000465298 MIER1Q8N108 512 aa17.22■□□□□ 0.35
ERGIC3-212ENST00000465298 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
ERGIC3-212ENST00000465298 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
ERGIC3-212ENST00000465298 PROM2Q8N271 834 aa17.21■□□□□ 0.35
ERGIC3-212ENST00000465298 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
ERGIC3-212ENST00000465298 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
ERGIC3-212ENST00000465298 ITGB4P16144 1822 aa17.2■□□□□ 0.34
ERGIC3-212ENST00000465298 GNAI1P63096 354 aa17.2■□□□□ 0.34
ERGIC3-212ENST00000465298 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
ERGIC3-212ENST00000465298 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-212ENST00000465298 STARD3NLO95772 234 aa17.19■□□□□ 0.34
ERGIC3-212ENST00000465298 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
ERGIC3-212ENST00000465298 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
ERGIC3-212ENST00000465298 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
ERGIC3-212ENST00000465298 RC3H1Q5TC82 1133 aaKnown RBP17.18■□□□□ 0.34
ERGIC3-212ENST00000465298 SLC15A2Q16348 729 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 AK7Q96M32 723 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 IL16Q14005 1332 aa17.17■□□□□ 0.34
ERGIC3-212ENST00000465298 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
ERGIC3-212ENST00000465298 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
ERGIC3-212ENST00000465298 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
ERGIC3-212ENST00000465298 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 CHL1O00533 1208 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 ZNF831Q5JPB2 1677 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 RREB1Q92766 1687 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 LY75O60449 1722 aa17.15■□□□□ 0.34
ERGIC3-212ENST00000465298 ADRA2BP18089 450 aa17.14■□□□□ 0.33
ERGIC3-212ENST00000465298 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-212ENST00000465298 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-212ENST00000465298 CNTNAP4Q9C0A0 1308 aa17.14■□□□□ 0.33
ERGIC3-212ENST00000465298 SLC16A10Q8TF71 515 aa17.13■□□□□ 0.33
ERGIC3-212ENST00000465298 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
ERGIC3-212ENST00000465298 THUMPD2Q9BTF0 503 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-212ENST00000465298 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-212ENST00000465298 HOXB7P09629 217 aa17.12■□□□□ 0.33
ERGIC3-212ENST00000465298 SSFA2P28290 1259 aa17.12■□□□□ 0.33
ERGIC3-212ENST00000465298 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
ERGIC3-212ENST00000465298 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-212ENST00000465298 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
ERGIC3-212ENST00000465298 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
ERGIC3-212ENST00000465298 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
ERGIC3-212ENST00000465298 ITPK1Q13572 414 aa17.1■□□□□ 0.33
ERGIC3-212ENST00000465298 R3HDM1Q15032 1099 aaKnown RBP17.1■□□□□ 0.33
ERGIC3-212ENST00000465298 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
ERGIC3-212ENST00000465298 A0A087WZG4 1122 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 GNPATO15228 680 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 CYP19A1P11511 503 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 CRKLP46109 303 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 PAPPAQ13219 1627 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 VIRMAQ69YN4 1812 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-212ENST00000465298 CICQ96RK0 1608 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-212ENST00000465298 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-212ENST00000465298 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
ERGIC3-212ENST00000465298 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-212ENST00000465298 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
ERGIC3-212ENST00000465298 KCNQ4P56696 695 aa17.07■□□□□ 0.32
ERGIC3-212ENST00000465298 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
ERGIC3-212ENST00000465298 C5P01031 1676 aa17.07■□□□□ 0.32
ERGIC3-212ENST00000465298 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-212ENST00000465298 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 685.9 ms