RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	NFATC2IP	Q8NCF5	419 aa		32.05	■■■□□ 2.72
RERE-208	ENST00000465125	SIPA1L3	O60292	1781 aa	Predicted RBP	32.04	■■■□□ 2.72
RERE-208	ENST00000465125	PIGB	Q92521	554 aa		32.04	■■■□□ 2.72
RERE-208	ENST00000465125	SF3B2	Q13435	895 aa	Known RBP	32.01	■■■□□ 2.71
RERE-208	ENST00000465125	CALD1	Q05682	793 aa	Known RBP	32	■■■□□ 2.71
RERE-208	ENST00000465125	WWC1	Q8IX03	1113 aa		32	■■■□□ 2.71
RERE-208	ENST00000465125	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
RERE-208	ENST00000465125	CCDC125	Q86Z20	511 aa		31.98	■■■□□ 2.71
RERE-208	ENST00000465125	APBA3	O96018	575 aa		31.97	■■■□□ 2.71
RERE-208	ENST00000465125	TAF7	Q15545	349 aa	Predicted RBP	31.97	■■■□□ 2.71
RERE-208	ENST00000465125	PAPPA	Q13219	1627 aa		31.97	■■■□□ 2.71
RERE-208	ENST00000465125	BTBD11	A6QL63	1104 aa		31.95	■■■□□ 2.71
RERE-208	ENST00000465125	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.95	■■■□□ 2.71
RERE-208	ENST00000465125	SMARCC1	Q92922	1105 aa	Predicted RBP	31.94	■■■□□ 2.7
RERE-208	ENST00000465125	ASAP1	Q9ULH1	1129 aa		31.94	■■■□□ 2.7
RERE-208	ENST00000465125	ATG3	Q9NT62	314 aa		31.93	■■■□□ 2.7
RERE-208	ENST00000465125	PALLD	Q8WX93	1383 aa		31.93	■■■□□ 2.7
RERE-208	ENST00000465125	BAG6	P46379	1132 aa		31.91	■■■□□ 2.7
RERE-208	ENST00000465125	SLC39A6	Q13433	755 aa		31.91	■■■□□ 2.7
RERE-208	ENST00000465125	WDR63	Q8IWG1	891 aa		31.91	■■■□□ 2.7
RERE-208	ENST00000465125	TTC5	Q8N0Z6	440 aa		31.91	■■■□□ 2.7
RERE-208	ENST00000465125	LAS1L	Q9Y4W2	734 aa	Known RBP	31.91	■■■□□ 2.7
RERE-208	ENST00000465125	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.9	■■■□□ 2.7
RERE-208	ENST00000465125	KDM3B	Q7LBC6	1761 aa		31.9	■■■□□ 2.7
RERE-208	ENST00000465125	RGPD4	Q7Z3J3	1758 aa		31.9	■■■□□ 2.7
RERE-208	ENST00000465125	ZNF521	Q96K83	1311 aa		31.9	■■■□□ 2.7
RERE-208	ENST00000465125	IFT57	Q9NWB7	429 aa		31.89	■■■□□ 2.7
RERE-208	ENST00000465125	BABAM1	Q9NWV8	329 aa		31.89	■■■□□ 2.7
RERE-208	ENST00000465125	MIS18A	Q9NYP9	233 aa		31.89	■■■□□ 2.7
RERE-208	ENST00000465125	TSPYL4	Q9UJ04	414 aa		31.89	■■■□□ 2.7
RERE-208	ENST00000465125	IL16	Q14005	1332 aa		31.89	■■■□□ 2.7
RERE-208	ENST00000465125	GNAI1	P63096	354 aa		31.88	■■■□□ 2.69
RERE-208	ENST00000465125	ZNF790	Q6PG37	636 aa		31.88	■■■□□ 2.69
RERE-208	ENST00000465125	CFAP44	Q96MT7	982 aa		31.88	■■■□□ 2.69
RERE-208	ENST00000465125	UBR2	Q8IWV8	1755 aa		31.87	■■■□□ 2.69
RERE-208	ENST00000465125	PLSCR1	O15162	318 aa		31.87	■■■□□ 2.69
RERE-208	ENST00000465125	LY75	O60449	1722 aa		31.86	■■■□□ 2.69
RERE-208	ENST00000465125	KCP	Q6ZWJ8	1503 aa		31.85	■■■□□ 2.69
RERE-208	ENST00000465125	CHL1	O00533	1208 aa		31.85	■■■□□ 2.69
RERE-208	ENST00000465125	PTCD1	O75127	700 aa	Known RBP	31.84	■■■□□ 2.69
RERE-208	ENST00000465125	ZNF853	P0CG23	659 aa		31.84	■■■□□ 2.69
RERE-208	ENST00000465125	RBM42	Q9BTD8	480 aa	Known RBP	31.84	■■■□□ 2.69
RERE-208	ENST00000465125	KCNQ3	O43525	872 aa		31.83	■■■□□ 2.69
RERE-208	ENST00000465125	EN1	Q05925	392 aa	Predicted RBP	31.83	■■■□□ 2.69
RERE-208	ENST00000465125	DEFB132	Q7Z7B7	95 aa		31.83	■■■□□ 2.69
RERE-208	ENST00000465125	ZBED9	Q6R2W3	1325 aa		31.82	■■■□□ 2.68
RERE-208	ENST00000465125	GOLGA2	Q08379	1002 aa		31.82	■■■□□ 2.68
RERE-208	ENST00000465125	FMNL2	Q96PY5	1086 aa		31.81	■■■□□ 2.68
RERE-208	ENST00000465125	MBIP	Q9NS73	344 aa		31.81	■■■□□ 2.68
RERE-208	ENST00000465125	LOC102724428	A0A0B4J2F2	783 aa		31.8	■■■□□ 2.68
RERE-208	ENST00000465125	SIK1	P57059	783 aa		31.8	■■■□□ 2.68
RERE-208	ENST00000465125	CAMKK2	Q96RR4	588 aa		31.8	■■■□□ 2.68
RERE-208	ENST00000465125	TXNRD1	Q16881	649 aa		31.79	■■■□□ 2.68
RERE-208	ENST00000465125	ZNF496	Q96IT1	587 aa	Predicted RBP	31.79	■■■□□ 2.68
RERE-208	ENST00000465125	CCNL1	Q9UK58	526 aa	Predicted RBP	31.79	■■■□□ 2.68
RERE-208	ENST00000465125	EZH2	Q15910	746 aa	Known RBP	31.78	■■■□□ 2.68
RERE-208	ENST00000465125	SLC27A3	Q5K4L6	730 aa		31.78	■■■□□ 2.68
RERE-208	ENST00000465125	YTHDC1	Q96MU7	727 aa	Known RBP	31.78	■■■□□ 2.68
RERE-208	ENST00000465125	MYH16	Q9H6N6	1097 aa		31.78	■■■□□ 2.68
RERE-208	ENST00000465125	ZNF831	Q5JPB2	1677 aa		31.78	■■■□□ 2.68
RERE-208	ENST00000465125	EIF4A1	P60842	406 aa	Known RBP	31.77	■■■□□ 2.68
RERE-208	ENST00000465125	TSR2	Q969E8	191 aa	Known RBP	31.77	■■■□□ 2.68
RERE-208	ENST00000465125	HEG1	Q9ULI3	1381 aa		31.77	■■■□□ 2.68
RERE-208	ENST00000465125	RREB1	Q92766	1687 aa		31.76	■■■□□ 2.68
RERE-208	ENST00000465125	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.76	■■■□□ 2.67
RERE-208	ENST00000465125	CIC	Q96RK0	1608 aa	Predicted RBP	31.75	■■■□□ 2.67
RERE-208	ENST00000465125		E9PSI1	815 aa		31.75	■■■□□ 2.67
RERE-208	ENST00000465125	ATP6V1A	P38606	617 aa		31.75	■■■□□ 2.67
RERE-208	ENST00000465125	VSIG10	Q8N0Z9	540 aa		31.75	■■■□□ 2.67
RERE-208	ENST00000465125	FANCI	Q9NVI1	1328 aa		31.75	■■■□□ 2.67
RERE-208	ENST00000465125	SLC4A9	Q96Q91	983 aa		31.74	■■■□□ 2.67
RERE-208	ENST00000465125	TJP1	Q07157	1748 aa		31.74	■■■□□ 2.67
RERE-208	ENST00000465125	PROM2	Q8N271	834 aa		31.73	■■■□□ 2.67
RERE-208	ENST00000465125	KCNQ4	P56696	695 aa		31.72	■■■□□ 2.67
RERE-208	ENST00000465125	C5	P01031	1676 aa		31.71	■■■□□ 2.67
RERE-208	ENST00000465125	SOCS7	O14512	581 aa		31.71	■■■□□ 2.67
RERE-208	ENST00000465125	SLFN5	Q08AF3	891 aa		31.71	■■■□□ 2.67
RERE-208	ENST00000465125	CDCA7L	Q96GN5	454 aa		31.71	■■■□□ 2.67
RERE-208	ENST00000465125	LRRC4B	Q9NT99	713 aa		31.71	■■■□□ 2.67
RERE-208	ENST00000465125	NUP188	Q5SRE5	1749 aa		31.7	■■■□□ 2.67
RERE-208	ENST00000465125	SNRPA1	P09661	255 aa	Known RBP	31.7	■■■□□ 2.67
RERE-208	ENST00000465125	ITPK1	Q13572	414 aa		31.7	■■■□□ 2.67
RERE-208	ENST00000465125	HMGB2	P26583	209 aa	Known RBP	31.69	■■■□□ 2.66
RERE-208	ENST00000465125	DNAJC10	Q8IXB1	793 aa		31.69	■■■□□ 2.66
RERE-208	ENST00000465125	TAF1L	Q8IZX4	1826 aa		31.69	■■■□□ 2.66
RERE-208	ENST00000465125	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.68	■■■□□ 2.66
RERE-208	ENST00000465125	COL5A3	P25940	1745 aa	Predicted RBP	31.67	■■■□□ 2.66
RERE-208	ENST00000465125	LAMB4	A4D0S4	1761 aa		31.67	■■■□□ 2.66
RERE-208	ENST00000465125	GIGYF1	O75420	1035 aa	Predicted RBP	31.67	■■■□□ 2.66
RERE-208	ENST00000465125	KRT24	Q2M2I5	525 aa		31.67	■■■□□ 2.66
RERE-208	ENST00000465125	LINC00116	Q8NCU8	138 aa		31.65	■■■□□ 2.66
RERE-208	ENST00000465125	PRAMEF22	A3QJZ6	481 aa		31.64	■■■□□ 2.66
RERE-208	ENST00000465125	C4B	P0C0L5	1744 aa		31.63	■■■□□ 2.65
RERE-208	ENST00000465125	STARD3NL	O95772	234 aa		31.63	■■■□□ 2.65
RERE-208	ENST00000465125	DUSP27	Q5VZP5	1158 aa		31.63	■■■□□ 2.65
RERE-208	ENST00000465125	HOXB7	P09629	217 aa		31.62	■■■□□ 2.65
RERE-208	ENST00000465125	EXOSC9	Q06265	439 aa	Known RBP	31.62	■■■□□ 2.65
RERE-208	ENST00000465125	TRMT2A	Q8IZ69	625 aa	Known RBP	31.62	■■■□□ 2.65
RERE-208	ENST00000465125	C8orf58	Q8NAV2	365 aa		31.62	■■■□□ 2.65
RERE-208	ENST00000465125	CYP19A1	P11511	503 aa	Predicted RBP	31.61	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms