RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-208ENST00000465125 NFATC2IPQ8NCF5 419 aa32.05■■■□□ 2.72
RERE-208ENST00000465125 SIPA1L3O60292 1781 aaPredicted RBP32.04■■■□□ 2.72
RERE-208ENST00000465125 PIGBQ92521 554 aa32.04■■■□□ 2.72
RERE-208ENST00000465125 SF3B2Q13435 895 aaKnown RBP32.01■■■□□ 2.71
RERE-208ENST00000465125 CALD1Q05682 793 aaKnown RBP32■■■□□ 2.71
RERE-208ENST00000465125 WWC1Q8IX03 1113 aa32■■■□□ 2.71
RERE-208ENST00000465125 HNRNPUQ00839 825 aaKnown RBP eCLIP31.98■■■□□ 2.71
RERE-208ENST00000465125 CCDC125Q86Z20 511 aa31.98■■■□□ 2.71
RERE-208ENST00000465125 APBA3O96018 575 aa31.97■■■□□ 2.71
RERE-208ENST00000465125 TAF7Q15545 349 aaPredicted RBP31.97■■■□□ 2.71
RERE-208ENST00000465125 PAPPAQ13219 1627 aa31.97■■■□□ 2.71
RERE-208ENST00000465125 BTBD11A6QL63 1104 aa31.95■■■□□ 2.71
RERE-208ENST00000465125 UPF1Q92900 1129 aaKnown RBP eCLIP31.95■■■□□ 2.71
RERE-208ENST00000465125 SMARCC1Q92922 1105 aaPredicted RBP31.94■■■□□ 2.7
RERE-208ENST00000465125 ASAP1Q9ULH1 1129 aa31.94■■■□□ 2.7
RERE-208ENST00000465125 ATG3Q9NT62 314 aa31.93■■■□□ 2.7
RERE-208ENST00000465125 PALLDQ8WX93 1383 aa31.93■■■□□ 2.7
RERE-208ENST00000465125 BAG6P46379 1132 aa31.91■■■□□ 2.7
RERE-208ENST00000465125 SLC39A6Q13433 755 aa31.91■■■□□ 2.7
RERE-208ENST00000465125 WDR63Q8IWG1 891 aa31.91■■■□□ 2.7
RERE-208ENST00000465125 TTC5Q8N0Z6 440 aa31.91■■■□□ 2.7
RERE-208ENST00000465125 LAS1LQ9Y4W2 734 aaKnown RBP31.91■■■□□ 2.7
RERE-208ENST00000465125 RGPD3A6NKT7 1758 aaPredicted RBP31.9■■■□□ 2.7
RERE-208ENST00000465125 KDM3BQ7LBC6 1761 aa31.9■■■□□ 2.7
RERE-208ENST00000465125 RGPD4Q7Z3J3 1758 aa31.9■■■□□ 2.7
RERE-208ENST00000465125 ZNF521Q96K83 1311 aa31.9■■■□□ 2.7
RERE-208ENST00000465125 IFT57Q9NWB7 429 aa31.89■■■□□ 2.7
RERE-208ENST00000465125 BABAM1Q9NWV8 329 aa31.89■■■□□ 2.7
RERE-208ENST00000465125 MIS18AQ9NYP9 233 aa31.89■■■□□ 2.7
RERE-208ENST00000465125 TSPYL4Q9UJ04 414 aa31.89■■■□□ 2.7
RERE-208ENST00000465125 IL16Q14005 1332 aa31.89■■■□□ 2.7
RERE-208ENST00000465125 GNAI1P63096 354 aa31.88■■■□□ 2.69
RERE-208ENST00000465125 ZNF790Q6PG37 636 aa31.88■■■□□ 2.69
RERE-208ENST00000465125 CFAP44Q96MT7 982 aa31.88■■■□□ 2.69
RERE-208ENST00000465125 UBR2Q8IWV8 1755 aa31.87■■■□□ 2.69
RERE-208ENST00000465125 PLSCR1O15162 318 aa31.87■■■□□ 2.69
RERE-208ENST00000465125 LY75O60449 1722 aa31.86■■■□□ 2.69
RERE-208ENST00000465125 KCPQ6ZWJ8 1503 aa31.85■■■□□ 2.69
RERE-208ENST00000465125 CHL1O00533 1208 aa31.85■■■□□ 2.69
RERE-208ENST00000465125 PTCD1O75127 700 aaKnown RBP31.84■■■□□ 2.69
RERE-208ENST00000465125 ZNF853P0CG23 659 aa31.84■■■□□ 2.69
RERE-208ENST00000465125 RBM42Q9BTD8 480 aaKnown RBP31.84■■■□□ 2.69
RERE-208ENST00000465125 KCNQ3O43525 872 aa31.83■■■□□ 2.69
RERE-208ENST00000465125 EN1Q05925 392 aaPredicted RBP31.83■■■□□ 2.69
RERE-208ENST00000465125 DEFB132Q7Z7B7 95 aa31.83■■■□□ 2.69
RERE-208ENST00000465125 ZBED9Q6R2W3 1325 aa31.82■■■□□ 2.68
RERE-208ENST00000465125 GOLGA2Q08379 1002 aa31.82■■■□□ 2.68
RERE-208ENST00000465125 FMNL2Q96PY5 1086 aa31.81■■■□□ 2.68
RERE-208ENST00000465125 MBIPQ9NS73 344 aa31.81■■■□□ 2.68
RERE-208ENST00000465125 LOC102724428A0A0B4J2F2 783 aa31.8■■■□□ 2.68
RERE-208ENST00000465125 SIK1P57059 783 aa31.8■■■□□ 2.68
RERE-208ENST00000465125 CAMKK2Q96RR4 588 aa31.8■■■□□ 2.68
RERE-208ENST00000465125 TXNRD1Q16881 649 aa31.79■■■□□ 2.68
RERE-208ENST00000465125 ZNF496Q96IT1 587 aaPredicted RBP31.79■■■□□ 2.68
RERE-208ENST00000465125 CCNL1Q9UK58 526 aaPredicted RBP31.79■■■□□ 2.68
RERE-208ENST00000465125 EZH2Q15910 746 aaKnown RBP31.78■■■□□ 2.68
RERE-208ENST00000465125 SLC27A3Q5K4L6 730 aa31.78■■■□□ 2.68
RERE-208ENST00000465125 YTHDC1Q96MU7 727 aaKnown RBP31.78■■■□□ 2.68
RERE-208ENST00000465125 MYH16Q9H6N6 1097 aa31.78■■■□□ 2.68
RERE-208ENST00000465125 ZNF831Q5JPB2 1677 aa31.78■■■□□ 2.68
RERE-208ENST00000465125 EIF4A1P60842 406 aaKnown RBP31.77■■■□□ 2.68
RERE-208ENST00000465125 TSR2Q969E8 191 aaKnown RBP31.77■■■□□ 2.68
RERE-208ENST00000465125 HEG1Q9ULI3 1381 aa31.77■■■□□ 2.68
RERE-208ENST00000465125 RREB1Q92766 1687 aa31.76■■■□□ 2.68
RERE-208ENST00000465125 SPINK5Q9NQ38 1064 aaPredicted RBP31.76■■■□□ 2.67
RERE-208ENST00000465125 CICQ96RK0 1608 aaPredicted RBP31.75■■■□□ 2.67
RERE-208ENST00000465125 E9PSI1 815 aa31.75■■■□□ 2.67
RERE-208ENST00000465125 ATP6V1AP38606 617 aa31.75■■■□□ 2.67
RERE-208ENST00000465125 VSIG10Q8N0Z9 540 aa31.75■■■□□ 2.67
RERE-208ENST00000465125 FANCIQ9NVI1 1328 aa31.75■■■□□ 2.67
RERE-208ENST00000465125 SLC4A9Q96Q91 983 aa31.74■■■□□ 2.67
RERE-208ENST00000465125 TJP1Q07157 1748 aa31.74■■■□□ 2.67
RERE-208ENST00000465125 PROM2Q8N271 834 aa31.73■■■□□ 2.67
RERE-208ENST00000465125 KCNQ4P56696 695 aa31.72■■■□□ 2.67
RERE-208ENST00000465125 C5P01031 1676 aa31.71■■■□□ 2.67
RERE-208ENST00000465125 SOCS7O14512 581 aa31.71■■■□□ 2.67
RERE-208ENST00000465125 SLFN5Q08AF3 891 aa31.71■■■□□ 2.67
RERE-208ENST00000465125 CDCA7LQ96GN5 454 aa31.71■■■□□ 2.67
RERE-208ENST00000465125 LRRC4BQ9NT99 713 aa31.71■■■□□ 2.67
RERE-208ENST00000465125 NUP188Q5SRE5 1749 aa31.7■■■□□ 2.67
RERE-208ENST00000465125 SNRPA1P09661 255 aaKnown RBP31.7■■■□□ 2.67
RERE-208ENST00000465125 ITPK1Q13572 414 aa31.7■■■□□ 2.67
RERE-208ENST00000465125 HMGB2P26583 209 aaKnown RBP31.69■■■□□ 2.66
RERE-208ENST00000465125 DNAJC10Q8IXB1 793 aa31.69■■■□□ 2.66
RERE-208ENST00000465125 TAF1LQ8IZX4 1826 aa31.69■■■□□ 2.66
RERE-208ENST00000465125 TEX13AQ9BXU3 409 aaPredicted RBP31.68■■■□□ 2.66
RERE-208ENST00000465125 COL5A3P25940 1745 aaPredicted RBP31.67■■■□□ 2.66
RERE-208ENST00000465125 LAMB4A4D0S4 1761 aa31.67■■■□□ 2.66
RERE-208ENST00000465125 GIGYF1O75420 1035 aaPredicted RBP31.67■■■□□ 2.66
RERE-208ENST00000465125 KRT24Q2M2I5 525 aa31.67■■■□□ 2.66
RERE-208ENST00000465125 LINC00116Q8NCU8 138 aa31.65■■■□□ 2.66
RERE-208ENST00000465125 PRAMEF22A3QJZ6 481 aa31.64■■■□□ 2.66
RERE-208ENST00000465125 C4BP0C0L5 1744 aa31.63■■■□□ 2.65
RERE-208ENST00000465125 STARD3NLO95772 234 aa31.63■■■□□ 2.65
RERE-208ENST00000465125 DUSP27Q5VZP5 1158 aa31.63■■■□□ 2.65
RERE-208ENST00000465125 HOXB7P09629 217 aa31.62■■■□□ 2.65
RERE-208ENST00000465125 EXOSC9Q06265 439 aaKnown RBP31.62■■■□□ 2.65
RERE-208ENST00000465125 TRMT2AQ8IZ69 625 aaKnown RBP31.62■■■□□ 2.65
RERE-208ENST00000465125 C8orf58Q8NAV2 365 aa31.62■■■□□ 2.65
RERE-208ENST00000465125 CYP19A1P11511 503 aaPredicted RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms