RNA–Protein interactions for RNA: ENST00000464916.1

COL1A2-203, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-203ENST00000464916 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
COL1A2-203ENST00000464916 PHKG2P15735 406 aa11.86□□□□□ -0.51
COL1A2-203ENST00000464916 KCNQ4P56696 695 aa11.86□□□□□ -0.51
COL1A2-203ENST00000464916 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL1A2-203ENST00000464916 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
COL1A2-203ENST00000464916 BCL9O00512 1426 aa11.86□□□□□ -0.51
COL1A2-203ENST00000464916 NEFMP07197 916 aa11.85□□□□□ -0.51
COL1A2-203ENST00000464916 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
COL1A2-203ENST00000464916 TNS1Q9HBL0 1735 aaKnown RBP11.85□□□□□ -0.51
COL1A2-203ENST00000464916 FCHSD2O94868 740 aa11.84□□□□□ -0.51
COL1A2-203ENST00000464916 CABP4P57796 275 aa11.84□□□□□ -0.51
COL1A2-203ENST00000464916 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
COL1A2-203ENST00000464916 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
COL1A2-203ENST00000464916 PIGBQ92521 554 aa11.83□□□□□ -0.52
COL1A2-203ENST00000464916 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
COL1A2-203ENST00000464916 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
COL1A2-203ENST00000464916 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
COL1A2-203ENST00000464916 PPP1R1BQ9UD71 204 aaPredicted RBP11.83□□□□□ -0.52
COL1A2-203ENST00000464916 SLC15A2Q16348 729 aa11.82□□□□□ -0.52
COL1A2-203ENST00000464916 COL3A1P02461 1466 aaPredicted RBP11.82□□□□□ -0.52
COL1A2-203ENST00000464916 GOLGA2Q08379 1002 aa11.81□□□□□ -0.52
COL1A2-203ENST00000464916 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
COL1A2-203ENST00000464916 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
COL1A2-203ENST00000464916 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
COL1A2-203ENST00000464916 SBF2Q86WG5 1849 aa11.81□□□□□ -0.52
COL1A2-203ENST00000464916 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 ZBTB7AO95365 584 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
COL1A2-203ENST00000464916 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
COL1A2-203ENST00000464916 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
COL1A2-203ENST00000464916 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 E9PSI1 815 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 HMGB2P26583 209 aaKnown RBP11.79□□□□□ -0.52
COL1A2-203ENST00000464916 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 GAS2L2Q8NHY3 880 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 SPON1Q9HCB6 807 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 DOT1LQ8TEK3 1739 aa11.79□□□□□ -0.52
COL1A2-203ENST00000464916 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
COL1A2-203ENST00000464916 APAF1O14727 1248 aa11.78□□□□□ -0.52
COL1A2-203ENST00000464916 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
COL1A2-203ENST00000464916 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
COL1A2-203ENST00000464916 AK7Q96M32 723 aa11.78□□□□□ -0.52
COL1A2-203ENST00000464916 BTAF1O14981 1849 aa11.78□□□□□ -0.52
COL1A2-203ENST00000464916 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 PHF14O94880 888 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
COL1A2-203ENST00000464916 TEFQ10587 303 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 ZNF827Q17R98 1081 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 ATG3Q9NT62 314 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 KDRP35968 1356 aa11.77□□□□□ -0.53
COL1A2-203ENST00000464916 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 SIK1P57059 783 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 TRMT2AQ8IZ69 625 aaKnown RBP11.76□□□□□ -0.53
COL1A2-203ENST00000464916 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 PLEKHF1Q96S99 279 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 PDGFDQ9GZP0 370 aaPredicted RBP11.76□□□□□ -0.53
COL1A2-203ENST00000464916 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
COL1A2-203ENST00000464916 RNMTO43148 476 aaKnown RBP11.75□□□□□ -0.53
COL1A2-203ENST00000464916 SLFN5Q08AF3 891 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 PHACTR3Q96KR7 559 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 IL16Q14005 1332 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
COL1A2-203ENST00000464916 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 PKD1L3Q7Z443 1732 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 SHANK3Q9BYB0 1731 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
COL1A2-203ENST00000464916 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
COL1A2-203ENST00000464916 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 SLC52A2Q9HAB3 445 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
COL1A2-203ENST00000464916 PLEKHG2Q9H7P9 1386 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 RREB1Q92766 1687 aa11.74□□□□□ -0.53
COL1A2-203ENST00000464916 GNPATO15228 680 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 POLD1P28340 1107 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
COL1A2-203ENST00000464916 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
COL1A2-203ENST00000464916 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
COL1A2-203ENST00000464916 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
COL1A2-203ENST00000464916 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
COL1A2-203ENST00000464916 MTFR1LQ9H019 292 aa11.72□□□□□ -0.53
COL1A2-203ENST00000464916 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
COL1A2-203ENST00000464916 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
COL1A2-203ENST00000464916 ITPK1Q13572 414 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 NEUROD2Q15784 382 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms