RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 HMMRO75330 724 aa21.81■■□□□ 1.08
LMO2-204ENST00000464025 EIF4A1P60842 406 aaKnown RBP21.81■■□□□ 1.08
LMO2-204ENST00000464025 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
LMO2-204ENST00000464025 C22orf23Q9BZE7 217 aa21.81■■□□□ 1.08
LMO2-204ENST00000464025 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
LMO2-204ENST00000464025 SIPA1L3O60292 1781 aaPredicted RBP21.8■■□□□ 1.08
LMO2-204ENST00000464025 COL18A1P39060 1754 aa21.8■■□□□ 1.08
LMO2-204ENST00000464025 ZNF530Q6P9A1 599 aaPredicted RBP21.79■■□□□ 1.08
LMO2-204ENST00000464025 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
LMO2-204ENST00000464025 F6X3S4 739 aa21.78■■□□□ 1.08
LMO2-204ENST00000464025 RBM25P49756 843 aaKnown RBP21.78■■□□□ 1.08
LMO2-204ENST00000464025 PLEKHM2Q8IWE5 1019 aa21.78■■□□□ 1.08
LMO2-204ENST00000464025 LGR6Q9HBX8 967 aa21.78■■□□□ 1.08
LMO2-204ENST00000464025 GNAI3P08754 354 aa21.78■■□□□ 1.08
LMO2-204ENST00000464025 AXIN2Q9Y2T1 843 aa21.78■■□□□ 1.08
LMO2-204ENST00000464025 ERBB3P21860 1342 aa21.77■■□□□ 1.08
LMO2-204ENST00000464025 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.08
LMO2-204ENST00000464025 RNMTO43148 476 aaKnown RBP21.77■■□□□ 1.08
LMO2-204ENST00000464025 GNAI2P04899 355 aa21.77■■□□□ 1.08
LMO2-204ENST00000464025 FKBP5Q13451 457 aaPredicted RBP21.77■■□□□ 1.08
LMO2-204ENST00000464025 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
LMO2-204ENST00000464025 LMOD2Q6P5Q4 547 aa21.77■■□□□ 1.08
LMO2-204ENST00000464025 NPHP3Q7Z494 1330 aa21.76■■□□□ 1.07
LMO2-204ENST00000464025 MFAP1P55081 439 aaKnown RBP21.76■■□□□ 1.07
LMO2-204ENST00000464025 C1orf141Q5JVX7 400 aa21.76■■□□□ 1.07
LMO2-204ENST00000464025 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
LMO2-204ENST00000464025 HEG1Q9ULI3 1381 aa21.75■■□□□ 1.07
LMO2-204ENST00000464025 TEFQ10587 303 aa21.75■■□□□ 1.07
LMO2-204ENST00000464025 XIRP1Q702N8 1843 aaKnown RBP21.75■■□□□ 1.07
LMO2-204ENST00000464025 PXDNQ92626 1479 aa21.75■■□□□ 1.07
LMO2-204ENST00000464025 TNS3Q68CZ2 1445 aa21.74■■□□□ 1.07
LMO2-204ENST00000464025 BTBD11A6QL63 1104 aa21.74■■□□□ 1.07
LMO2-204ENST00000464025 TBC1D2Q9BYX2 928 aa21.73■■□□□ 1.07
LMO2-204ENST00000464025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.73■■□□□ 1.07
LMO2-204ENST00000464025 CDC45O75419 566 aa21.72■■□□□ 1.07
LMO2-204ENST00000464025 ATP8B2P98198 1209 aa21.72■■□□□ 1.07
LMO2-204ENST00000464025 TTC22Q5TAA0 569 aa21.72■■□□□ 1.07
LMO2-204ENST00000464025 SCN11AQ9UI33 1791 aa21.71■■□□□ 1.07
LMO2-204ENST00000464025 MPRIPQ6WCQ1 1025 aa21.71■■□□□ 1.07
LMO2-204ENST00000464025 TBC1D9Q6ZT07 1266 aa21.7■■□□□ 1.06
LMO2-204ENST00000464025 OSBPL3Q9H4L5 887 aa21.7■■□□□ 1.06
LMO2-204ENST00000464025 GSPT1P15170 499 aaKnown RBP21.7■■□□□ 1.06
LMO2-204ENST00000464025 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
LMO2-204ENST00000464025 SPATA31A3Q5VYP0 1347 aa21.69■■□□□ 1.06
LMO2-204ENST00000464025 CPDO75976 1380 aa21.69■■□□□ 1.06
LMO2-204ENST00000464025 USP44Q9H0E7 712 aa21.69■■□□□ 1.06
LMO2-204ENST00000464025 ZC3H6P61129 1189 aaKnown RBP21.68■■□□□ 1.06
LMO2-204ENST00000464025 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
LMO2-204ENST00000464025 SNX21Q969T3 373 aa21.68■■□□□ 1.06
LMO2-204ENST00000464025 KCNQ3O43525 872 aa21.67■■□□□ 1.06
LMO2-204ENST00000464025 ANTXR1Q9H6X2 564 aa21.67■■□□□ 1.06
LMO2-204ENST00000464025 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
LMO2-204ENST00000464025 STRCQ7RTU9 1775 aa21.67■■□□□ 1.06
LMO2-204ENST00000464025 DBF4Q9UBU7 674 aaPredicted RBP21.66■■□□□ 1.06
LMO2-204ENST00000464025 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
LMO2-204ENST00000464025 C16orf71Q8IYS4 520 aaPredicted RBP21.65■■□□□ 1.06
LMO2-204ENST00000464025 RAPGEF4Q8WZA2 1011 aa21.65■■□□□ 1.06
LMO2-204ENST00000464025 PKD1L3Q7Z443 1732 aa21.65■■□□□ 1.06
LMO2-204ENST00000464025 SRCIN1Q9C0H9 1055 aa21.65■■□□□ 1.06
LMO2-204ENST00000464025 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
LMO2-204ENST00000464025 IBTKQ9P2D0 1353 aaPredicted RBP21.64■■□□□ 1.05
LMO2-204ENST00000464025 UBTFL1P0CB47 393 aaPredicted RBP21.64■■□□□ 1.05
LMO2-204ENST00000464025 TATP17735 454 aaPredicted RBP21.64■■□□□ 1.05
LMO2-204ENST00000464025 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
LMO2-204ENST00000464025 DNAAF4Q8WXU2 420 aa21.64■■□□□ 1.05
LMO2-204ENST00000464025 SPG7Q9UQ90 795 aa21.64■■□□□ 1.05
LMO2-204ENST00000464025 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.05
LMO2-204ENST00000464025 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
LMO2-204ENST00000464025 BEND3Q5T5X7 828 aa21.63■■□□□ 1.05
LMO2-204ENST00000464025 SSH3Q8TE77 659 aa21.63■■□□□ 1.05
LMO2-204ENST00000464025 HSPA2P54652 639 aa21.62■■□□□ 1.05
LMO2-204ENST00000464025 LRRFIP2Q9Y608 721 aaKnown RBP21.62■■□□□ 1.05
LMO2-204ENST00000464025 MRC1P22897 1456 aa21.62■■□□□ 1.05
LMO2-204ENST00000464025 SMARCA5O60264 1052 aaPredicted RBP21.61■■□□□ 1.05
LMO2-204ENST00000464025 DEKP35659 375 aaKnown RBP21.61■■□□□ 1.05
LMO2-204ENST00000464025 OTUD7AQ8TE49 926 aaPredicted RBP21.61■■□□□ 1.05
LMO2-204ENST00000464025 DDX17Q92841 729 aaKnown RBP21.61■■□□□ 1.05
LMO2-204ENST00000464025 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 PNMA6EA0A0J9YXQ4 647 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 KDM6AO15550 1401 aaPredicted RBP21.61■■□□□ 1.05
LMO2-204ENST00000464025 PHKG2P15735 406 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 POLA2Q14181 598 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 KIF2CQ99661 725 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
LMO2-204ENST00000464025 MEGF6O75095 1541 aa21.6■■□□□ 1.05
LMO2-204ENST00000464025 SDSP20132 328 aa21.6■■□□□ 1.05
LMO2-204ENST00000464025 PDE1AP54750 535 aa21.6■■□□□ 1.05
LMO2-204ENST00000464025 HYPKQ9NX55 129 aa21.6■■□□□ 1.05
LMO2-204ENST00000464025 ADCY9O60503 1353 aa21.6■■□□□ 1.05
LMO2-204ENST00000464025 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 RAB11FIP3O75154 756 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 ALDH1L1O75891 902 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 BRINP3Q76B58 766 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 HSCBQ8IWL3 235 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 IFNL2Q8IZJ0 200 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 SLC52A2Q9HAB3 445 aa21.59■■□□□ 1.05
LMO2-204ENST00000464025 PLEKHG5O94827 1062 aa21.58■■□□□ 1.05
LMO2-204ENST00000464025 CASC1Q6TDU7 716 aa21.58■■□□□ 1.05
LMO2-204ENST00000464025 STAP2Q9UGK3 403 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms