RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
CDKL5-203ENST00000463994 MBD3O95983 291 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 MKRN3Q13064 507 aaKnown RBP8.49□□□□□ -1.05
CDKL5-203ENST00000463994 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
CDKL5-203ENST00000463994 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 FBXO18Q8NFZ0 1043 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 GOLGA5Q8TBA6 731 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 GPT2Q8TD30 523 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 PPM1EQ8WY54 764 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 PAIP2Q9BPZ3 127 aaKnown RBP8.49□□□□□ -1.05
CDKL5-203ENST00000463994 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 FANCAO15360 1455 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 ADGRL2O95490 1459 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 KANK1Q14678 1352 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
CDKL5-203ENST00000463994 MMS22LQ6ZRQ5 1243 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-203ENST00000463994 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
CDKL5-203ENST00000463994 V9GYY5 206 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-203ENST00000463994 MYO5CQ9NQX4 1742 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 CTAGE5O15320 804 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
CDKL5-203ENST00000463994 ADCY5O95622 1261 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 E9PCH4 1651 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 ZFYVE16Q7Z3T8 1539 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKL5-203ENST00000463994 ITSN2Q9NZM3 1697 aa8.47□□□□□ -1.05
CDKL5-203ENST00000463994 NAA30Q147X3 362 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-203ENST00000463994 SYAP1Q96A49 352 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-203ENST00000463994 FBXO38Q6PIJ6 1188 aa8.46□□□□□ -1.05
CDKL5-203ENST00000463994 IQUBQ8NA54 791 aa8.46□□□□□ -1.05
CDKL5-203ENST00000463994 TACO1Q9BSH4 297 aaKnown RBP8.46□□□□□ -1.05
CDKL5-203ENST00000463994 PYCARDQ9ULZ3 195 aa8.46□□□□□ -1.05
CDKL5-203ENST00000463994 MTA1Q13330 715 aa8.46□□□□□ -1.06
CDKL5-203ENST00000463994 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
CDKL5-203ENST00000463994 USP25Q9UHP3 1055 aa8.46□□□□□ -1.06
CDKL5-203ENST00000463994 CROCC2H7BZ55 1655 aa8.46□□□□□ -1.06
CDKL5-203ENST00000463994 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
CDKL5-203ENST00000463994 IRX1P78414 480 aaPredicted RBP8.45□□□□□ -1.06
CDKL5-203ENST00000463994 GOLGA2Q08379 1002 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 AK7Q96M32 723 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 ANKRD33BA6NCL7 494 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 GTF3C6Q969F1 213 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 PTPRCP08575 1304 aa8.45□□□□□ -1.06
CDKL5-203ENST00000463994 PLCH2O75038 1416 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-203ENST00000463994 IVLP07476 585 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 JAKMIP3Q5VZ66 844 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 RWDD1Q9H446 243 aaPredicted RBP8.44□□□□□ -1.06
CDKL5-203ENST00000463994 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 TPM1P09493 284 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 ERO1AQ96HE7 468 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 ANKRD36BQ8N2N9 1353 aa8.44□□□□□ -1.06
CDKL5-203ENST00000463994 CAMSAP2Q08AD1 1489 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 TTC37Q6PGP7 1564 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 SMC2O95347 1197 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 CPP00450 1065 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 ERCC3P19447 782 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 KCNF1Q9H3M0 494 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 FHOD1Q9Y613 1164 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 ANKRD30AQ9BXX3 1397 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 KDM5DQ9BY66 1539 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
CDKL5-203ENST00000463994 PSD3Q9NYI0 1048 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 PTPRMP28827 1452 aa8.43□□□□□ -1.06
CDKL5-203ENST00000463994 EIF3CLB5ME19 914 aaKnown RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 PLA2G4AP47712 749 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 CCDC96Q2M329 555 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 DNAAF4Q8WXU2 420 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 C16orf45Q96MC5 204 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 EIF3CQ99613 913 aaKnown RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 KIF2CQ99661 725 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 RPS6KL1Q9Y6S9 549 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 TROQ12816 1431 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 C9orf84Q5VXU9 1444 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 KIF2AO00139 706 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 POLR3GO15318 223 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 C21orf2O43822 256 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 COQ9O75208 318 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 PNMA6AP0CW24 399 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 USP8P40818 1118 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 INHBEP58166 350 aa8.42□□□□□ -1.06
CDKL5-203ENST00000463994 ZRSR1Q15695 479 aaKnown RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 ERCC4Q92889 916 aaPredicted RBP8.42□□□□□ -1.06
CDKL5-203ENST00000463994 AGLP35573 1532 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ACTN2P35609 894 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ST5P78524 1137 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ZNF215Q9UL58 517 aaPredicted RBP8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
CDKL5-203ENST00000463994 PREX2Q70Z35 1606 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms