RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 BACH1O14867 736 aa7.83□□□□□ -1.16
HERC4-208ENST00000463478 INHAP05111 366 aa7.83□□□□□ -1.16
HERC4-208ENST00000463478 ADH1AP07327 375 aa7.83□□□□□ -1.16
HERC4-208ENST00000463478 SMPD1P17405 629 aa7.83□□□□□ -1.16
HERC4-208ENST00000463478 WASLO00401 505 aaPredicted RBP7.82□□□□□ -1.16
HERC4-208ENST00000463478 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
HERC4-208ENST00000463478 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
HERC4-208ENST00000463478 CXXC1Q9P0U4 656 aaPredicted RBP7.82□□□□□ -1.16
HERC4-208ENST00000463478 TIMP2P16035 220 aa7.81□□□□□ -1.16
HERC4-208ENST00000463478 SCNN1AP37088 669 aa7.81□□□□□ -1.16
HERC4-208ENST00000463478 OCLNQ16625 522 aa7.81□□□□□ -1.16
HERC4-208ENST00000463478 AGBL1Q96MI9 1066 aa7.81□□□□□ -1.16
HERC4-208ENST00000463478 KLF16Q9BXK1 252 aaPredicted RBP7.81□□□□□ -1.16
HERC4-208ENST00000463478 RELBQ01201 579 aa7.8□□□□□ -1.16
HERC4-208ENST00000463478 Q6ZVU0 165 aa7.8□□□□□ -1.16
HERC4-208ENST00000463478 CCER1Q8TC90 406 aaPredicted RBP7.8□□□□□ -1.16
HERC4-208ENST00000463478 HPS1Q92902 700 aa7.8□□□□□ -1.16
HERC4-208ENST00000463478 A0A1W2PRU2 124 aa7.79□□□□□ -1.16
HERC4-208ENST00000463478 IL2RAP01589 272 aa7.79□□□□□ -1.16
HERC4-208ENST00000463478 ARID4AP29374 1257 aaPredicted RBP7.79□□□□□ -1.16
HERC4-208ENST00000463478 GAS2L2Q8NHY3 880 aa7.79□□□□□ -1.16
HERC4-208ENST00000463478 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
HERC4-208ENST00000463478 MKNK1Q9BUB5 465 aa7.79□□□□□ -1.16
HERC4-208ENST00000463478 MEN1O00255 615 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 WEE1P30291 646 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 PTGIRP43119 386 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 TLR1Q15399 786 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 TMCO4Q5TGY1 634 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
HERC4-208ENST00000463478 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 CNKSR1Q969H4 720 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 XAGE2Q96GT9 111 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
HERC4-208ENST00000463478 TSPAN10Q9H1Z9 355 aaPredicted RBP7.78□□□□□ -1.16
HERC4-208ENST00000463478 ZNF395Q9H8N7 513 aaPredicted RBP7.78□□□□□ -1.16
HERC4-208ENST00000463478 GNEQ9Y223 722 aaKnown RBP7.78□□□□□ -1.16
HERC4-208ENST00000463478 A6NJY4 79 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 SMTNP53814 917 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 EPHA4P54764 986 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 CLN3Q13286 438 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 FKBP5Q13451 457 aaPredicted RBP7.77□□□□□ -1.17
HERC4-208ENST00000463478 TBCELQ5QJ74 424 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 CHMP7Q8WUX9 453 aaPredicted RBP7.77□□□□□ -1.17
HERC4-208ENST00000463478 PURBQ96QR8 312 aaKnown RBP7.77□□□□□ -1.17
HERC4-208ENST00000463478 ESYT1Q9BSJ8 1104 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 MTMR7Q9Y216 660 aa7.77□□□□□ -1.17
HERC4-208ENST00000463478 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
HERC4-208ENST00000463478 ATAD2Q6PL18 1390 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 AVPP01185 164 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 IGFBP4P22692 258 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 SERPINB4P48594 390 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 MEIOBQ8N635 442 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
HERC4-208ENST00000463478 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
HERC4-208ENST00000463478 PPP1R12BO60237 982 aaPredicted RBP7.75□□□□□ -1.17
HERC4-208ENST00000463478 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
HERC4-208ENST00000463478 CRIPAKQ8N1N5 446 aa7.75□□□□□ -1.17
HERC4-208ENST00000463478 VTI1AQ96AJ9 217 aa7.75□□□□□ -1.17
HERC4-208ENST00000463478 SCHIP1Q9P0W5 487 aaPredicted RBP7.75□□□□□ -1.17
HERC4-208ENST00000463478 FOXO3O43524 673 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 C21orf2O43822 256 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 ABL1P00519 1130 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 MTFR1Q15390 333 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 USP3Q9Y6I4 520 aa7.74□□□□□ -1.17
HERC4-208ENST00000463478 ST8SIA5O15466 376 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
HERC4-208ENST00000463478 FOXK2Q01167 660 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 CENPCQ03188 943 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 CAPN12Q6ZSI9 719 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 SND1Q7KZF4 910 aaKnown RBP eCLIP7.73□□□□□ -1.17
HERC4-208ENST00000463478 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
HERC4-208ENST00000463478 SEPT3Q9UH03 358 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
HERC4-208ENST00000463478 CDK2AP1O14519 115 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 UPP2O95045 317 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 ZNF211Q13398 564 aaPredicted RBP7.72□□□□□ -1.17
HERC4-208ENST00000463478 CTC1Q2NKJ3 1217 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 NBPF15Q8N660 670 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 ZSCAN10Q96SZ4 725 aaPredicted RBP7.72□□□□□ -1.17
HERC4-208ENST00000463478 INSM2Q96T92 566 aaPredicted RBP7.72□□□□□ -1.17
HERC4-208ENST00000463478 FHDC1Q9C0D6 1143 aaPredicted RBP7.72□□□□□ -1.17
HERC4-208ENST00000463478 CHMP3Q9Y3E7 222 aa7.72□□□□□ -1.17
HERC4-208ENST00000463478 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 SMCPP49901 116 aaPredicted RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 MFAP1P55081 439 aaKnown RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 PSMA6P60900 246 aaKnown RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
HERC4-208ENST00000463478 ZNF787Q6DD87 383 aa7.71□□□□□ -1.18
HERC4-208ENST00000463478 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 ANO2Q9NQ90 1003 aa7.71□□□□□ -1.18
HERC4-208ENST00000463478 CABP1Q9NZU7 370 aa7.71□□□□□ -1.18
HERC4-208ENST00000463478 IQSEC3Q9UPP2 1182 aaPredicted RBP7.71□□□□□ -1.18
HERC4-208ENST00000463478 SOWAHDA6NJG2 315 aa7.7□□□□□ -1.18
HERC4-208ENST00000463478 BMP2P12643 396 aa7.7□□□□□ -1.18
HERC4-208ENST00000463478 C6orf118Q5T5N4 469 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms