RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
SMC3-202ENST00000462899 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
SMC3-202ENST00000462899 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
SMC3-202ENST00000462899 FLAD1Q8NFF5 587 aa11.03□□□□□ -0.64
SMC3-202ENST00000462899 PUS7Q96PZ0 661 aaKnown RBP11.03□□□□□ -0.64
SMC3-202ENST00000462899 SBF1O95248 1867 aa11.02□□□□□ -0.64
SMC3-202ENST00000462899 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
SMC3-202ENST00000462899 APLP1P51693 650 aa11.02□□□□□ -0.65
SMC3-202ENST00000462899 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
SMC3-202ENST00000462899 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
SMC3-202ENST00000462899 LTV1Q96GA3 475 aaPredicted RBP11.02□□□□□ -0.65
SMC3-202ENST00000462899 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
SMC3-202ENST00000462899 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
SMC3-202ENST00000462899 FBLN1P23142 703 aa11.01□□□□□ -0.65
SMC3-202ENST00000462899 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
SMC3-202ENST00000462899 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
SMC3-202ENST00000462899 PCDH11XQ9BZA7 1347 aa11□□□□□ -0.65
SMC3-202ENST00000462899 PCDH11YQ9BZA8 1340 aa11□□□□□ -0.65
SMC3-202ENST00000462899 C10orf71Q711Q0 1435 aa11□□□□□ -0.65
SMC3-202ENST00000462899 TOMM70O94826 608 aa10.99□□□□□ -0.65
SMC3-202ENST00000462899 TMC1Q8TDI8 760 aa10.99□□□□□ -0.65
SMC3-202ENST00000462899 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
SMC3-202ENST00000462899 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
SMC3-202ENST00000462899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
SMC3-202ENST00000462899 HAX1O00165 279 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 CYP27B1O15528 508 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 HMGB2P26583 209 aaKnown RBP10.98□□□□□ -0.65
SMC3-202ENST00000462899 SSFA2P28290 1259 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
SMC3-202ENST00000462899 AMPHP49418 695 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 LINC00116Q8NCU8 138 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 COG3Q96JB2 828 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 TESK2Q96S53 571 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
SMC3-202ENST00000462899 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 INSRP06213 1382 aa10.97□□□□□ -0.65
SMC3-202ENST00000462899 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
SMC3-202ENST00000462899 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
SMC3-202ENST00000462899 KDRP35968 1356 aa10.96□□□□□ -0.65
SMC3-202ENST00000462899 KIF24Q5T7B8 1368 aa10.96□□□□□ -0.65
SMC3-202ENST00000462899 RRS1Q15050 365 aaKnown RBP10.96□□□□□ -0.65
SMC3-202ENST00000462899 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
SMC3-202ENST00000462899 AK7Q96M32 723 aa10.96□□□□□ -0.65
SMC3-202ENST00000462899 FLT4P35916 1363 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
SMC3-202ENST00000462899 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
SMC3-202ENST00000462899 MPRIPQ6WCQ1 1025 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 RAPGEF4Q8WZA2 1011 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 PIGBQ92521 554 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
SMC3-202ENST00000462899 KLRG1Q96E93 195 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
SMC3-202ENST00000462899 PHF14O94880 888 aa10.94□□□□□ -0.66
SMC3-202ENST00000462899 ITPK1Q13572 414 aa10.94□□□□□ -0.66
SMC3-202ENST00000462899 RBM46Q8TBY0 533 aaKnown RBP10.94□□□□□ -0.66
SMC3-202ENST00000462899 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
SMC3-202ENST00000462899 DLEC1Q9Y238 1755 aa10.94□□□□□ -0.66
SMC3-202ENST00000462899 PLEKHG2Q9H7P9 1386 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 FYB1O15117 783 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
SMC3-202ENST00000462899 SIK1P57059 783 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 TGFB2P61812 414 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 EVX2Q03828 476 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 HSP90AB2PQ58FF8 381 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
SMC3-202ENST00000462899 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 MMP10P09238 476 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 NUBP1P53384 320 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 HTRA3P83110 453 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 TJP1Q07157 1748 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
SMC3-202ENST00000462899 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
SMC3-202ENST00000462899 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
SMC3-202ENST00000462899 KCNA3P22001 575 aa10.91□□□□□ -0.66
SMC3-202ENST00000462899 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
SMC3-202ENST00000462899 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
SMC3-202ENST00000462899 NRXN2Q9P2S2 1712 aa10.91□□□□□ -0.66
SMC3-202ENST00000462899 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
SMC3-202ENST00000462899 GNPATO15228 680 aa10.9□□□□□ -0.66
SMC3-202ENST00000462899 PRELPP51888 382 aa10.9□□□□□ -0.66
SMC3-202ENST00000462899 FSTL1Q12841 308 aa10.9□□□□□ -0.66
SMC3-202ENST00000462899 ASAP1Q9ULH1 1129 aa10.9□□□□□ -0.66
SMC3-202ENST00000462899 KDM6AO15550 1401 aaPredicted RBP10.9□□□□□ -0.66
SMC3-202ENST00000462899 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
SMC3-202ENST00000462899 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
SMC3-202ENST00000462899 GGNBP2Q9H3C7 697 aa10.89□□□□□ -0.67
SMC3-202ENST00000462899 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
SMC3-202ENST00000462899 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
SMC3-202ENST00000462899 DPEP1P16444 411 aa10.88□□□□□ -0.67
SMC3-202ENST00000462899 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
SMC3-202ENST00000462899 DCAF5Q96JK2 942 aa10.88□□□□□ -0.67
SMC3-202ENST00000462899 ATG3Q9NT62 314 aa10.88□□□□□ -0.67
SMC3-202ENST00000462899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.679e-8■■■■□ 19.4
SMC3-202ENST00000462899 VIRMAQ69YN4 1812 aaKnown RBP10.88□□□□□ -0.67
SMC3-202ENST00000462899 ST20-MTHFSA0A0A6YYL1 179 aa10.87□□□□□ -0.67
SMC3-202ENST00000462899 GYS1P13807 737 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms