RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 ADAMTS7Q9UKP4 1686 aa12.65□□□□□ -0.38
SRRM1-205ENST00000462710 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
SRRM1-205ENST00000462710 MSL1Q68DK7 614 aa12.65□□□□□ -0.38
SRRM1-205ENST00000462710 KDM6AO15550 1401 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-205ENST00000462710 CCDC87Q9NVE4 849 aa12.64□□□□□ -0.39
SRRM1-205ENST00000462710 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
SRRM1-205ENST00000462710 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
SRRM1-205ENST00000462710 TJP1Q07157 1748 aa12.63□□□□□ -0.39
SRRM1-205ENST00000462710 SBF1O95248 1867 aa12.62□□□□□ -0.39
SRRM1-205ENST00000462710 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
SRRM1-205ENST00000462710 PHKG2P15735 406 aa12.62□□□□□ -0.39
SRRM1-205ENST00000462710 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
SRRM1-205ENST00000462710 RPS6KA4O75676 772 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
SRRM1-205ENST00000462710 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 MPRIPQ6WCQ1 1025 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
SRRM1-205ENST00000462710 ITPK1Q13572 414 aa12.6□□□□□ -0.39
SRRM1-205ENST00000462710 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
SRRM1-205ENST00000462710 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
SRRM1-205ENST00000462710 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
SRRM1-205ENST00000462710 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 RTCBQ9Y3I0 505 aaKnown RBP12.59□□□□□ -0.39
SRRM1-205ENST00000462710 MMP10P09238 476 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 GGNBP2Q9H3C7 697 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 SCN11AQ9UI33 1791 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 MRC1P22897 1456 aa12.59□□□□□ -0.39
SRRM1-205ENST00000462710 GNPATO15228 680 aa12.58□□□□□ -0.4
SRRM1-205ENST00000462710 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
SRRM1-205ENST00000462710 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
SRRM1-205ENST00000462710 GYS1P13807 737 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 KCNA3P22001 575 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 AMOTQ4VCS5 1084 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 EYA1Q99502 592 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 PARP3Q9Y6F1 533 aa12.57□□□□□ -0.4
SRRM1-205ENST00000462710 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
SRRM1-205ENST00000462710 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
SRRM1-205ENST00000462710 PIM2Q9P1W9 311 aa12.56□□□□□ -0.4
SRRM1-205ENST00000462710 DICER1Q9UPY3 1922 aaKnown RBP12.55□□□□□ -0.4
SRRM1-205ENST00000462710 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 PHF14O94880 888 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 DPEP1P16444 411 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 PRELPP51888 382 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
SRRM1-205ENST00000462710 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
SRRM1-205ENST00000462710 TIAM2Q8IVF5 1701 aa12.54□□□□□ -0.4
SRRM1-205ENST00000462710 FBLN1P23142 703 aa12.54□□□□□ -0.4
SRRM1-205ENST00000462710 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-205ENST00000462710 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
SRRM1-205ENST00000462710 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
SRRM1-205ENST00000462710 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
SRRM1-205ENST00000462710 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 FCHSD2O94868 740 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 TM4SF1P30408 202 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 DALRD3Q5D0E6 543 aaKnown RBP12.53□□□□□ -0.4
SRRM1-205ENST00000462710 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
SRRM1-205ENST00000462710 BCS1LQ9Y276 419 aa12.52□□□□□ -0.4
SRRM1-205ENST00000462710 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
SRRM1-205ENST00000462710 RFC4P35249 363 aa12.52□□□□□ -0.41
SRRM1-205ENST00000462710 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.41
SRRM1-205ENST00000462710 NMRK2Q9NPI5 230 aa12.51□□□□□ -0.41
SRRM1-205ENST00000462710 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
SRRM1-205ENST00000462710 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
SRRM1-205ENST00000462710 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
SRRM1-205ENST00000462710 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
SRRM1-205ENST00000462710 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
SRRM1-205ENST00000462710 POLRMTO00411 1230 aaKnown RBP12.49□□□□□ -0.41
SRRM1-205ENST00000462710 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
SRRM1-205ENST00000462710 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
SRRM1-205ENST00000462710 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-205ENST00000462710 GLTPD2A6NH11 291 aa12.47□□□□□ -0.41
SRRM1-205ENST00000462710 RGL2O15211 777 aa12.47□□□□□ -0.41
SRRM1-205ENST00000462710 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
SRRM1-205ENST00000462710 CABP4P57796 275 aa12.47□□□□□ -0.41
SRRM1-205ENST00000462710 DDR1Q08345 913 aa12.47□□□□□ -0.41
SRRM1-205ENST00000462710 LMNB1P20700 586 aa12.46□□□□□ -0.41
SRRM1-205ENST00000462710 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
SRRM1-205ENST00000462710 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
SRRM1-205ENST00000462710 RNF181Q9P0P0 153 aa12.46□□□□□ -0.42
SRRM1-205ENST00000462710 VEGFAP15692 232 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-205ENST00000462710 NARFQ9UHQ1 456 aa12.45□□□□□ -0.42
SRRM1-205ENST00000462710 SCN4AP35499 1836 aa12.45□□□□□ -0.42
SRRM1-205ENST00000462710 BCORQ6W2J9 1755 aa12.45□□□□□ -0.42
SRRM1-205ENST00000462710 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
SRRM1-205ENST00000462710 A0A087WZG4 1122 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
SRRM1-205ENST00000462710 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 TNS4Q8IZW8 715 aa12.44□□□□□ -0.42
SRRM1-205ENST00000462710 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms