RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SIK1P57059 783 aa21.11■□□□□ 0.97
ERCC3-206ENST00000462306 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
ERCC3-206ENST00000462306 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
ERCC3-206ENST00000462306 CASZ1Q86V15 1759 aa21.1■□□□□ 0.97
ERCC3-206ENST00000462306 C5P01031 1676 aa21.09■□□□□ 0.97
ERCC3-206ENST00000462306 VIRMAQ69YN4 1812 aaKnown RBP21.09■□□□□ 0.97
ERCC3-206ENST00000462306 TAF1LQ8IZX4 1826 aa21.08■□□□□ 0.97
ERCC3-206ENST00000462306 SLC4A9Q96Q91 983 aa21.08■□□□□ 0.97
ERCC3-206ENST00000462306 ITPK1Q13572 414 aa21.07■□□□□ 0.96
ERCC3-206ENST00000462306 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
ERCC3-206ENST00000462306 LRP5O75197 1615 aa21.07■□□□□ 0.96
ERCC3-206ENST00000462306 SRCAPQ6ZRS2 3230 aa21.06■□□□□ 0.96
ERCC3-206ENST00000462306 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
ERCC3-206ENST00000462306 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
ERCC3-206ENST00000462306 RBM42Q9BTD8 480 aaKnown RBP21.06■□□□□ 0.96
ERCC3-206ENST00000462306 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
ERCC3-206ENST00000462306 PNNQ9H307 717 aaKnown RBP21.05■□□□□ 0.96
ERCC3-206ENST00000462306 TFCP2L1Q9NZI6 479 aa21.05■□□□□ 0.96
ERCC3-206ENST00000462306 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
ERCC3-206ENST00000462306 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
ERCC3-206ENST00000462306 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
ERCC3-206ENST00000462306 QSER1Q2KHR3 1735 aa21.04■□□□□ 0.96
ERCC3-206ENST00000462306 TUBGCP6Q96RT7 1819 aa21.04■□□□□ 0.96
ERCC3-206ENST00000462306 HTATSF1O43719 755 aaKnown RBP21.03■□□□□ 0.96
ERCC3-206ENST00000462306 PTCD1O75127 700 aaKnown RBP21.03■□□□□ 0.96
ERCC3-206ENST00000462306 NEFMP07197 916 aa21.03■□□□□ 0.96
ERCC3-206ENST00000462306 SLC39A6Q13433 755 aa21.03■□□□□ 0.96
ERCC3-206ENST00000462306 TEFQ10587 303 aa21.02■□□□□ 0.96
ERCC3-206ENST00000462306 SIPA1L3O60292 1781 aaPredicted RBP21.02■□□□□ 0.96
ERCC3-206ENST00000462306 ZBTB7AO95365 584 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 WDR43Q15061 677 aaKnown RBP eCLIP21.01■□□□□ 0.95
ERCC3-206ENST00000462306 NFE2L2Q16236 605 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 MCM10Q7L590 875 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
ERCC3-206ENST00000462306 SPON1Q9HCB6 807 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
ERCC3-206ENST00000462306 KCPQ6ZWJ8 1503 aa21■□□□□ 0.95
ERCC3-206ENST00000462306 ANP32CO43423 234 aa21■□□□□ 0.95
ERCC3-206ENST00000462306 DCTN1Q14203 1278 aa21■□□□□ 0.95
ERCC3-206ENST00000462306 CCDC184Q52MB2 194 aa21■□□□□ 0.95
ERCC3-206ENST00000462306 AMIGO3Q86WK7 504 aa21■□□□□ 0.95
ERCC3-206ENST00000462306 COL23A1Q86Y22 540 aaPredicted RBP20.99■□□□□ 0.95
ERCC3-206ENST00000462306 AK7Q96M32 723 aa20.99■□□□□ 0.95
ERCC3-206ENST00000462306 CICQ96RK0 1608 aaPredicted RBP20.99■□□□□ 0.95
ERCC3-206ENST00000462306 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
ERCC3-206ENST00000462306 DLG5Q8TDM6 1919 aa20.98■□□□□ 0.95
ERCC3-206ENST00000462306 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
ERCC3-206ENST00000462306 ATF5Q9Y2D1 282 aaPredicted RBP20.98■□□□□ 0.95
ERCC3-206ENST00000462306 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
ERCC3-206ENST00000462306 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
ERCC3-206ENST00000462306 SLC16A10Q8TF71 515 aa20.97■□□□□ 0.95
ERCC3-206ENST00000462306 TJP1Q07157 1748 aa20.97■□□□□ 0.95
ERCC3-206ENST00000462306 UBR2Q8IWV8 1755 aa20.97■□□□□ 0.95
ERCC3-206ENST00000462306 UBR3Q6ZT12 1888 aa20.96■□□□□ 0.95
ERCC3-206ENST00000462306 PTGER2P43116 358 aa20.96■□□□□ 0.95
ERCC3-206ENST00000462306 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
ERCC3-206ENST00000462306 SMIM5Q71RC9 77 aa20.96■□□□□ 0.95
ERCC3-206ENST00000462306 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
ERCC3-206ENST00000462306 GNPATO15228 680 aa20.95■□□□□ 0.94
ERCC3-206ENST00000462306 TMPOP42166 694 aaKnown RBP20.95■□□□□ 0.94
ERCC3-206ENST00000462306 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
ERCC3-206ENST00000462306 FLAD1Q8NFF5 587 aa20.95■□□□□ 0.94
ERCC3-206ENST00000462306 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
ERCC3-206ENST00000462306 SGIP1Q9BQI5 828 aa20.95■□□□□ 0.94
ERCC3-206ENST00000462306 BTBD11A6QL63 1104 aa20.94■□□□□ 0.94
ERCC3-206ENST00000462306 SSFA2P28290 1259 aa20.94■□□□□ 0.94
ERCC3-206ENST00000462306 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
ERCC3-206ENST00000462306 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
ERCC3-206ENST00000462306 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
ERCC3-206ENST00000462306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
ERCC3-206ENST00000462306 KCNQ3O43525 872 aa20.93■□□□□ 0.94
ERCC3-206ENST00000462306 RIPK4P57078 832 aa20.93■□□□□ 0.94
ERCC3-206ENST00000462306 MYH14Q7Z406 1995 aaKnown RBP20.92■□□□□ 0.94
ERCC3-206ENST00000462306 MSH5O43196 834 aa20.92■□□□□ 0.94
ERCC3-206ENST00000462306 PHF14O94880 888 aa20.92■□□□□ 0.94
ERCC3-206ENST00000462306 CRKLP46109 303 aaKnown RBP20.92■□□□□ 0.94
ERCC3-206ENST00000462306 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
ERCC3-206ENST00000462306 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
ERCC3-206ENST00000462306 RPS6KA4O75676 772 aa20.91■□□□□ 0.94
ERCC3-206ENST00000462306 CYP19A1P11511 503 aaPredicted RBP20.91■□□□□ 0.94
ERCC3-206ENST00000462306 COL24A1Q17RW2 1714 aa20.91■□□□□ 0.94
ERCC3-206ENST00000462306 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
ERCC3-206ENST00000462306 HEG1Q9ULI3 1381 aa20.9■□□□□ 0.94
ERCC3-206ENST00000462306 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
ERCC3-206ENST00000462306 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
ERCC3-206ENST00000462306 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
ERCC3-206ENST00000462306 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
ERCC3-206ENST00000462306 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
ERCC3-206ENST00000462306 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
ERCC3-206ENST00000462306 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
ERCC3-206ENST00000462306 ADRA2BP18089 450 aa20.87■□□□□ 0.93
ERCC3-206ENST00000462306 LMOD3Q0VAK6 560 aa20.87■□□□□ 0.93
ERCC3-206ENST00000462306 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
ERCC3-206ENST00000462306 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
ERCC3-206ENST00000462306 PPP1R1BQ9UD71 204 aaPredicted RBP20.87■□□□□ 0.93
ERCC3-206ENST00000462306 TRIM35Q9UPQ4 493 aa20.87■□□□□ 0.93
ERCC3-206ENST00000462306 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
ERCC3-206ENST00000462306 ARHGEF1Q92888 912 aaKnown RBP20.86■□□□□ 0.93
ERCC3-206ENST00000462306 TEX13AQ9BXU3 409 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms