RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
LINC00879-201ENST00000462219 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
LINC00879-201ENST00000462219 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
LINC00879-201ENST00000462219 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
LINC00879-201ENST00000462219 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
LINC00879-201ENST00000462219 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
LINC00879-201ENST00000462219 NEFMP07197 916 aa17.22■□□□□ 0.35
LINC00879-201ENST00000462219 KCNQ4P56696 695 aa17.22■□□□□ 0.35
LINC00879-201ENST00000462219 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
LINC00879-201ENST00000462219 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
LINC00879-201ENST00000462219 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
LINC00879-201ENST00000462219 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
LINC00879-201ENST00000462219 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
LINC00879-201ENST00000462219 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
LINC00879-201ENST00000462219 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
LINC00879-201ENST00000462219 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
LINC00879-201ENST00000462219 MCM10Q7L590 875 aa17.2■□□□□ 0.34
LINC00879-201ENST00000462219 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
LINC00879-201ENST00000462219 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
LINC00879-201ENST00000462219 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
LINC00879-201ENST00000462219 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
LINC00879-201ENST00000462219 C5P01031 1676 aa17.19■□□□□ 0.34
LINC00879-201ENST00000462219 RIPK4P57078 832 aa17.18■□□□□ 0.34
LINC00879-201ENST00000462219 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
LINC00879-201ENST00000462219 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
LINC00879-201ENST00000462219 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
LINC00879-201ENST00000462219 SIK1P57059 783 aa17.17■□□□□ 0.34
LINC00879-201ENST00000462219 TEFQ10587 303 aa17.17■□□□□ 0.34
LINC00879-201ENST00000462219 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
LINC00879-201ENST00000462219 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
LINC00879-201ENST00000462219 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
LINC00879-201ENST00000462219 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
LINC00879-201ENST00000462219 COL5A3P25940 1745 aaPredicted RBP17.16■□□□□ 0.34
LINC00879-201ENST00000462219 CICQ96RK0 1608 aaPredicted RBP17.15■□□□□ 0.34
LINC00879-201ENST00000462219 APAF1O14727 1248 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 ITPK1Q13572 414 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 NBPF14Q5TI25 921 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
LINC00879-201ENST00000462219 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 TJP1Q07157 1748 aa17.15■□□□□ 0.34
LINC00879-201ENST00000462219 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
LINC00879-201ENST00000462219 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
LINC00879-201ENST00000462219 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
LINC00879-201ENST00000462219 NEUROD2Q15784 382 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 SLC15A2Q16348 729 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 ZNF827Q17R98 1081 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 MIER1Q8N108 512 aa17.14■□□□□ 0.33
LINC00879-201ENST00000462219 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
LINC00879-201ENST00000462219 MYH14Q7Z406 1995 aaKnown RBP17.14■□□□□ 0.33
LINC00879-201ENST00000462219 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
LINC00879-201ENST00000462219 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
LINC00879-201ENST00000462219 KDM3BQ7LBC6 1761 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 KCNQ3O43525 872 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
LINC00879-201ENST00000462219 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
LINC00879-201ENST00000462219 CASZ1Q86V15 1759 aa17.11■□□□□ 0.33
LINC00879-201ENST00000462219 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
LINC00879-201ENST00000462219 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
LINC00879-201ENST00000462219 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
LINC00879-201ENST00000462219 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
LINC00879-201ENST00000462219 PDGFDQ9GZP0 370 aaPredicted RBP17.09■□□□□ 0.33
LINC00879-201ENST00000462219 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.32
LINC00879-201ENST00000462219 AMIGO3Q86WK7 504 aa17.08■□□□□ 0.32
LINC00879-201ENST00000462219 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
LINC00879-201ENST00000462219 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
LINC00879-201ENST00000462219 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
LINC00879-201ENST00000462219 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
LINC00879-201ENST00000462219 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
LINC00879-201ENST00000462219 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
LINC00879-201ENST00000462219 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
LINC00879-201ENST00000462219 CYP19A1P11511 503 aaPredicted RBP17.05■□□□□ 0.32
LINC00879-201ENST00000462219 CCDC27Q2M243 656 aa17.05■□□□□ 0.32
LINC00879-201ENST00000462219 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
LINC00879-201ENST00000462219 SMIM5Q71RC9 77 aa17.05■□□□□ 0.32
LINC00879-201ENST00000462219 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
LINC00879-201ENST00000462219 TFCP2L1Q9NZI6 479 aa17.05■□□□□ 0.32
LINC00879-201ENST00000462219 CNTNAP4Q9C0A0 1308 aa17.04■□□□□ 0.32
LINC00879-201ENST00000462219 CHL1O00533 1208 aa17.04■□□□□ 0.32
LINC00879-201ENST00000462219 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
LINC00879-201ENST00000462219 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
LINC00879-201ENST00000462219 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
LINC00879-201ENST00000462219 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
LINC00879-201ENST00000462219 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
LINC00879-201ENST00000462219 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
LINC00879-201ENST00000462219 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
LINC00879-201ENST00000462219 AK7Q96M32 723 aa17.03■□□□□ 0.32
LINC00879-201ENST00000462219 COL24A1Q17RW2 1714 aa17.02■□□□□ 0.32
LINC00879-201ENST00000462219 WWC1Q8IX03 1113 aa17.02■□□□□ 0.32
LINC00879-201ENST00000462219 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
LINC00879-201ENST00000462219 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
LINC00879-201ENST00000462219 GNPATO15228 680 aa17.01■□□□□ 0.31
LINC00879-201ENST00000462219 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
LINC00879-201ENST00000462219 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms