RNA–Protein interactions for RNA: ENST00000462163.1

RPN2-207, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-207ENST00000462163 RIPK4P57078 832 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 CABP4P57796 275 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 PIGBQ92521 554 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
RPN2-207ENST00000462163 KCPQ6ZWJ8 1503 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
RPN2-207ENST00000462163 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
RPN2-207ENST00000462163 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
RPN2-207ENST00000462163 APBA3O96018 575 aa12.54□□□□□ -0.4
RPN2-207ENST00000462163 SF3B2Q13435 895 aaKnown RBP12.54□□□□□ -0.4
RPN2-207ENST00000462163 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
RPN2-207ENST00000462163 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
RPN2-207ENST00000462163 SLC52A2Q9HAB3 445 aa12.54□□□□□ -0.4
RPN2-207ENST00000462163 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
RPN2-207ENST00000462163 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
RPN2-207ENST00000462163 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
RPN2-207ENST00000462163 TEFQ10587 303 aa12.53□□□□□ -0.4
RPN2-207ENST00000462163 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
RPN2-207ENST00000462163 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
RPN2-207ENST00000462163 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
RPN2-207ENST00000462163 BAG6P46379 1132 aa12.52□□□□□ -0.41
RPN2-207ENST00000462163 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
RPN2-207ENST00000462163 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
RPN2-207ENST00000462163 ASAP1Q9ULH1 1129 aa12.51□□□□□ -0.41
RPN2-207ENST00000462163 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
RPN2-207ENST00000462163 PLSCR1O15162 318 aa12.5□□□□□ -0.41
RPN2-207ENST00000462163 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
RPN2-207ENST00000462163 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
RPN2-207ENST00000462163 ATG3Q9NT62 314 aa12.5□□□□□ -0.41
RPN2-207ENST00000462163 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
RPN2-207ENST00000462163 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
RPN2-207ENST00000462163 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
RPN2-207ENST00000462163 CCDC27Q2M243 656 aa12.48□□□□□ -0.41
RPN2-207ENST00000462163 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
RPN2-207ENST00000462163 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
RPN2-207ENST00000462163 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
RPN2-207ENST00000462163 NCBP3Q53F19 620 aaKnown RBP12.47□□□□□ -0.41
RPN2-207ENST00000462163 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
RPN2-207ENST00000462163 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
RPN2-207ENST00000462163 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 KCNQ3O43525 872 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
RPN2-207ENST00000462163 KCNQ4P56696 695 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 SIK1P57059 783 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 TAF7Q15545 349 aaPredicted RBP12.46□□□□□ -0.41
RPN2-207ENST00000462163 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 PROM2Q8N271 834 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
RPN2-207ENST00000462163 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.41
RPN2-207ENST00000462163 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
RPN2-207ENST00000462163 SLC4A9Q96Q91 983 aa12.45□□□□□ -0.42
RPN2-207ENST00000462163 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
RPN2-207ENST00000462163 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
RPN2-207ENST00000462163 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 ZNF521Q96K83 1311 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
RPN2-207ENST00000462163 ITPK1Q13572 414 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
RPN2-207ENST00000462163 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
RPN2-207ENST00000462163 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
RPN2-207ENST00000462163 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
RPN2-207ENST00000462163 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
RPN2-207ENST00000462163 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
RPN2-207ENST00000462163 IFT57Q9NWB7 429 aa12.43□□□□□ -0.42
RPN2-207ENST00000462163 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
RPN2-207ENST00000462163 IL16Q14005 1332 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 CHL1O00533 1208 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPN2-207ENST00000462163 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
RPN2-207ENST00000462163 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
RPN2-207ENST00000462163 GNAI1P63096 354 aa12.41□□□□□ -0.42
RPN2-207ENST00000462163 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
RPN2-207ENST00000462163 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
RPN2-207ENST00000462163 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
RPN2-207ENST00000462163 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.42
RPN2-207ENST00000462163 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
RPN2-207ENST00000462163 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
RPN2-207ENST00000462163 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
RPN2-207ENST00000462163 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
RPN2-207ENST00000462163 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
RPN2-207ENST00000462163 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
RPN2-207ENST00000462163 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
RPN2-207ENST00000462163 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
RPN2-207ENST00000462163 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
RPN2-207ENST00000462163 BCORQ6W2J9 1755 aa12.38□□□□□ -0.43
RPN2-207ENST00000462163 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
RPN2-207ENST00000462163 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
RPN2-207ENST00000462163 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
RPN2-207ENST00000462163 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
RPN2-207ENST00000462163 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms