RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
CCM2-203ENST00000461377 C1orf141Q5JVX7 400 aa25.31■■□□□ 1.64
CCM2-203ENST00000461377 XIRP1Q702N8 1843 aaKnown RBP25.31■■□□□ 1.64
CCM2-203ENST00000461377 RNMTO43148 476 aaKnown RBP25.31■■□□□ 1.64
CCM2-203ENST00000461377 HOXB7P09629 217 aa25.31■■□□□ 1.64
CCM2-203ENST00000461377 SLC4A10Q6U841 1118 aa25.31■■□□□ 1.64
CCM2-203ENST00000461377 NECTIN2Q92692 538 aa25.31■■□□□ 1.64
CCM2-203ENST00000461377 CACNA1FO60840 1977 aa25.3■■□□□ 1.64
CCM2-203ENST00000461377 TEFQ10587 303 aa25.3■■□□□ 1.64
CCM2-203ENST00000461377 HDGFL1Q5TGJ6 251 aa25.3■■□□□ 1.64
CCM2-203ENST00000461377 FKBP5Q13451 457 aaPredicted RBP25.29■■□□□ 1.64
CCM2-203ENST00000461377 BMP2KLQ5H9B9 411 aa25.29■■□□□ 1.64
CCM2-203ENST00000461377 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
CCM2-203ENST00000461377 PXDNLA1KZ92 1463 aa25.29■■□□□ 1.64
CCM2-203ENST00000461377 DAXXQ9UER7 740 aaPredicted RBP25.29■■□□□ 1.64
CCM2-203ENST00000461377 ABCC6O95255 1503 aa25.29■■□□□ 1.64
CCM2-203ENST00000461377 COL18A1P39060 1754 aa25.29■■□□□ 1.64
CCM2-203ENST00000461377 SLC4A3P48751 1232 aa25.28■■□□□ 1.64
CCM2-203ENST00000461377 STRCQ7RTU9 1775 aa25.28■■□□□ 1.64
CCM2-203ENST00000461377 SPATA31A3Q5VYP0 1347 aa25.28■■□□□ 1.64
CCM2-203ENST00000461377 CRYBG1Q9Y4K1 1723 aa25.27■■□□□ 1.64
CCM2-203ENST00000461377 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
CCM2-203ENST00000461377 KDM4FA0A1W2PPD8 638 aa25.27■■□□□ 1.64
CCM2-203ENST00000461377 BTBD11A6QL63 1104 aa25.27■■□□□ 1.64
CCM2-203ENST00000461377 ADAMTS7Q9UKP4 1686 aa25.26■■□□□ 1.63
CCM2-203ENST00000461377 CHMP4AQ9BY43 222 aa25.25■■□□□ 1.63
CCM2-203ENST00000461377 KCNQ3O43525 872 aa25.25■■□□□ 1.63
CCM2-203ENST00000461377 BRINP3Q76B58 766 aa25.23■■□□□ 1.63
CCM2-203ENST00000461377 CABLES1Q8TDN4 633 aa25.23■■□□□ 1.63
CCM2-203ENST00000461377 GNAI2P04899 355 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 NBR1Q14596 966 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 CPDO75976 1380 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 HMMRO75330 724 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 GNAI3P08754 354 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 MFAP1P55081 439 aaKnown RBP25.22■■□□□ 1.63
CCM2-203ENST00000461377 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
CCM2-203ENST00000461377 RAPGEF4Q8WZA2 1011 aa25.21■■□□□ 1.63
CCM2-203ENST00000461377 PHAXQ9H814 394 aaKnown RBP25.21■■□□□ 1.63
CCM2-203ENST00000461377 PLEKHG2Q9H7P9 1386 aa25.21■■□□□ 1.63
CCM2-203ENST00000461377 SIPA1L3O60292 1781 aaPredicted RBP25.21■■□□□ 1.63
CCM2-203ENST00000461377 EIF2S2P20042 333 aaKnown RBP25.2■■□□□ 1.63
CCM2-203ENST00000461377 PLEKHM2Q8IWE5 1019 aa25.2■■□□□ 1.63
CCM2-203ENST00000461377 HEG1Q9ULI3 1381 aa25.2■■□□□ 1.62
CCM2-203ENST00000461377 C22orf23Q9BZE7 217 aa25.2■■□□□ 1.62
CCM2-203ENST00000461377 TATP17735 454 aaPredicted RBP25.18■■□□□ 1.62
CCM2-203ENST00000461377 BECN1Q14457 450 aa25.18■■□□□ 1.62
CCM2-203ENST00000461377 CHPF2Q9P2E5 772 aa25.18■■□□□ 1.62
CCM2-203ENST00000461377 MEGF6O75095 1541 aa25.18■■□□□ 1.62
CCM2-203ENST00000461377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.18■■□□□ 1.62
CCM2-203ENST00000461377 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
CCM2-203ENST00000461377 ZNF335Q9H4Z2 1342 aaPredicted RBP25.16■■□□□ 1.62
CCM2-203ENST00000461377 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
CCM2-203ENST00000461377 CSB-PGBD3P0DP91 1061 aa25.15■■□□□ 1.62
CCM2-203ENST00000461377 SPG7Q9UQ90 795 aa25.15■■□□□ 1.62
CCM2-203ENST00000461377 GSPT1P15170 499 aaKnown RBP25.14■■□□□ 1.62
CCM2-203ENST00000461377 KDM6AO15550 1401 aaPredicted RBP25.14■■□□□ 1.62
CCM2-203ENST00000461377 C16orf71Q8IYS4 520 aaPredicted RBP25.14■■□□□ 1.61
CCM2-203ENST00000461377 USP44Q9H0E7 712 aa25.14■■□□□ 1.61
CCM2-203ENST00000461377 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
CCM2-203ENST00000461377 PHKG2P15735 406 aa25.13■■□□□ 1.61
CCM2-203ENST00000461377 ATP8B2P98198 1209 aa25.13■■□□□ 1.61
CCM2-203ENST00000461377 TTC22Q5TAA0 569 aa25.13■■□□□ 1.61
CCM2-203ENST00000461377 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
CCM2-203ENST00000461377 DBF4Q9UBU7 674 aaPredicted RBP25.13■■□□□ 1.61
CCM2-203ENST00000461377 SCN11AQ9UI33 1791 aa25.12■■□□□ 1.61
CCM2-203ENST00000461377 SMARCA5O60264 1052 aaPredicted RBP25.12■■□□□ 1.61
CCM2-203ENST00000461377 TBC1D9Q6ZT07 1266 aa25.12■■□□□ 1.61
CCM2-203ENST00000461377 SRCIN1Q9C0H9 1055 aa25.12■■□□□ 1.61
CCM2-203ENST00000461377 RBM25P49756 843 aaKnown RBP25.11■■□□□ 1.61
CCM2-203ENST00000461377 OTUD7AQ8TE49 926 aaPredicted RBP25.11■■□□□ 1.61
CCM2-203ENST00000461377 DNAAF4Q8WXU2 420 aa25.11■■□□□ 1.61
CCM2-203ENST00000461377 LRRFIP2Q9Y608 721 aaKnown RBP25.11■■□□□ 1.61
CCM2-203ENST00000461377 CDC45O75419 566 aa25.1■■□□□ 1.61
CCM2-203ENST00000461377 UBTFL1P0CB47 393 aaPredicted RBP25.1■■□□□ 1.61
CCM2-203ENST00000461377 SLC52A2Q9HAB3 445 aa25.1■■□□□ 1.61
CCM2-203ENST00000461377 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
CCM2-203ENST00000461377 ADCY9O60503 1353 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 BEND3Q5T5X7 828 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 PNMA6EA0A0J9YXQ4 647 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 PI4KAP2A4QPH2 592 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 APBB1O00213 710 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 ANXA1P04083 346 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 PI4KAP1Q8N8J0 262 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 TBC1D2Q9BYX2 928 aa25.09■■□□□ 1.61
CCM2-203ENST00000461377 MRC1P22897 1456 aa25.08■■□□□ 1.61
CCM2-203ENST00000461377 RTL5Q5HYW3 569 aaPredicted RBP25.08■■□□□ 1.61
CCM2-203ENST00000461377 USP35Q9P2H5 1018 aa25.07■■□□□ 1.6
CCM2-203ENST00000461377 PRAMEF22A3QJZ6 481 aa25.06■■□□□ 1.6
CCM2-203ENST00000461377 ZNF790Q6PG37 636 aa25.06■■□□□ 1.6
CCM2-203ENST00000461377 EXOC6BQ9Y2D4 811 aa25.05■■□□□ 1.6
CCM2-203ENST00000461377 IBTKQ9P2D0 1353 aaPredicted RBP25.05■■□□□ 1.6
CCM2-203ENST00000461377 CYP27B1O15528 508 aa25.05■■□□□ 1.6
CCM2-203ENST00000461377 PROSER3Q2NL68 480 aa25.05■■□□□ 1.6
CCM2-203ENST00000461377 DCAF5Q96JK2 942 aa25.05■■□□□ 1.6
CCM2-203ENST00000461377 OSBPL3Q9H4L5 887 aa25.05■■□□□ 1.6
CCM2-203ENST00000461377 SSH3Q8TE77 659 aa25.04■■□□□ 1.6
CCM2-203ENST00000461377 PRDM11Q9NQV5 511 aa25.04■■□□□ 1.6
CCM2-203ENST00000461377 HYPKQ9NX55 129 aa25.04■■□□□ 1.6
CCM2-203ENST00000461377 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms