RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
SHANK1-205ENST00000461154 SPON1Q9HCB6 807 aa21.49■■□□□ 1.03
SHANK1-205ENST00000461154 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
SHANK1-205ENST00000461154 PAPPAQ13219 1627 aa21.48■■□□□ 1.03
SHANK1-205ENST00000461154 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
SHANK1-205ENST00000461154 RTF1Q92541 710 aaKnown RBP21.48■■□□□ 1.03
SHANK1-205ENST00000461154 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
SHANK1-205ENST00000461154 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
SHANK1-205ENST00000461154 MRC1P22897 1456 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
SHANK1-205ENST00000461154 SIK1P57059 783 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 LRP5O75197 1615 aa21.47■■□□□ 1.03
SHANK1-205ENST00000461154 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
SHANK1-205ENST00000461154 RUNDC1Q96C34 613 aa21.46■■□□□ 1.03
SHANK1-205ENST00000461154 PDGFDQ9GZP0 370 aaPredicted RBP21.46■■□□□ 1.03
SHANK1-205ENST00000461154 TEFQ10587 303 aa21.45■■□□□ 1.02
SHANK1-205ENST00000461154 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
SHANK1-205ENST00000461154 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
SHANK1-205ENST00000461154 IL17REQ8NFR9 667 aa21.44■■□□□ 1.02
SHANK1-205ENST00000461154 DLG5Q8TDM6 1919 aa21.44■■□□□ 1.02
SHANK1-205ENST00000461154 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
SHANK1-205ENST00000461154 PNISRQ8TF01 805 aaKnown RBP21.43■■□□□ 1.02
SHANK1-205ENST00000461154 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
SHANK1-205ENST00000461154 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
SHANK1-205ENST00000461154 SLC16A10Q8TF71 515 aa21.42■■□□□ 1.02
SHANK1-205ENST00000461154 RBM42Q9BTD8 480 aaKnown RBP21.42■■□□□ 1.02
SHANK1-205ENST00000461154 MTFR1LQ9H019 292 aa21.42■■□□□ 1.02
SHANK1-205ENST00000461154 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
SHANK1-205ENST00000461154 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
SHANK1-205ENST00000461154 CASZ1Q86V15 1759 aa21.41■■□□□ 1.02
SHANK1-205ENST00000461154 TMPOP42166 694 aaKnown RBP21.4■■□□□ 1.02
SHANK1-205ENST00000461154 MCM10Q7L590 875 aa21.4■■□□□ 1.02
SHANK1-205ENST00000461154 FLAD1Q8NFF5 587 aa21.4■■□□□ 1.02
SHANK1-205ENST00000461154 AK7Q96M32 723 aa21.4■■□□□ 1.02
SHANK1-205ENST00000461154 SIPA1L3O60292 1781 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-205ENST00000461154 RIPK4P57078 832 aa21.39■■□□□ 1.01
SHANK1-205ENST00000461154 PPP1R1BQ9UD71 204 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-205ENST00000461154 ATF5Q9Y2D1 282 aaPredicted RBP21.39■■□□□ 1.01
SHANK1-205ENST00000461154 ITPK1Q13572 414 aa21.38■■□□□ 1.01
SHANK1-205ENST00000461154 DCTN1Q14203 1278 aa21.37■■□□□ 1.01
SHANK1-205ENST00000461154 LINC00116Q8NCU8 138 aa21.37■■□□□ 1.01
SHANK1-205ENST00000461154 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
SHANK1-205ENST00000461154 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
SHANK1-205ENST00000461154 MSH5O43196 834 aa21.36■■□□□ 1.01
SHANK1-205ENST00000461154 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
SHANK1-205ENST00000461154 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
SHANK1-205ENST00000461154 SLC4A9Q96Q91 983 aa21.36■■□□□ 1.01
SHANK1-205ENST00000461154 C5P01031 1676 aa21.36■■□□□ 1.01
SHANK1-205ENST00000461154 TAF1LQ8IZX4 1826 aa21.35■■□□□ 1.01
SHANK1-205ENST00000461154 PTGER2P43116 358 aa21.35■■□□□ 1.01
SHANK1-205ENST00000461154 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
SHANK1-205ENST00000461154 COL23A1Q86Y22 540 aaPredicted RBP21.35■■□□□ 1.01
SHANK1-205ENST00000461154 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
SHANK1-205ENST00000461154 QSER1Q2KHR3 1735 aa21.35■■□□□ 1.01
SHANK1-205ENST00000461154 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
SHANK1-205ENST00000461154 APAF1O14727 1248 aa21.34■■□□□ 1.01
SHANK1-205ENST00000461154 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
SHANK1-205ENST00000461154 SLC39A6Q13433 755 aa21.33■■□□□ 1.01
SHANK1-205ENST00000461154 TAF7Q15545 349 aaPredicted RBP21.33■■□□□ 1.01
SHANK1-205ENST00000461154 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1.01
SHANK1-205ENST00000461154 FAM9BQ8IZU0 186 aa21.33■■□□□ 1.01
SHANK1-205ENST00000461154 SSFA2P28290 1259 aa21.32■■□□□ 1
SHANK1-205ENST00000461154 ZNF790Q6PG37 636 aa21.32■■□□□ 1
SHANK1-205ENST00000461154 UBR2Q8IWV8 1755 aa21.32■■□□□ 1
SHANK1-205ENST00000461154 GNPATO15228 680 aa21.31■■□□□ 1
SHANK1-205ENST00000461154 POLD1P28340 1107 aa21.31■■□□□ 1
SHANK1-205ENST00000461154 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
SHANK1-205ENST00000461154 KCPQ6ZWJ8 1503 aa21.3■■□□□ 1
SHANK1-205ENST00000461154 CICQ96RK0 1608 aaPredicted RBP21.3■■□□□ 1
SHANK1-205ENST00000461154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.3■■□□□ 1
SHANK1-205ENST00000461154 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
SHANK1-205ENST00000461154 RTCBQ9Y3I0 505 aaKnown RBP21.3■■□□□ 1
SHANK1-205ENST00000461154 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
SHANK1-205ENST00000461154 PHF14O94880 888 aa21.29■■□□□ 1
SHANK1-205ENST00000461154 VSIG10Q8N0Z9 540 aa21.29■■□□□ 1
SHANK1-205ENST00000461154 TRIM35Q9UPQ4 493 aa21.29■■□□□ 1
SHANK1-205ENST00000461154 TUBGCP6Q96RT7 1819 aa21.28■■□□□ 1
SHANK1-205ENST00000461154 FMNL2Q96PY5 1086 aa21.28■■□□□ 1
SHANK1-205ENST00000461154 ARXQ96QS3 562 aa21.28■■□□□ 1
SHANK1-205ENST00000461154 COL5A3P25940 1745 aaPredicted RBP21.28■■□□□ 1
SHANK1-205ENST00000461154 RPS6KA4O75676 772 aa21.27■■□□□ 1
SHANK1-205ENST00000461154 TRAPPC3LQ5T215 181 aa21.27■■□□□ 1
SHANK1-205ENST00000461154 MIER1Q8N108 512 aa21.27■■□□□ 1
SHANK1-205ENST00000461154 TJP1Q07157 1748 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 ADRA2BP18089 450 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 CALD1Q05682 793 aaKnown RBP21.26■□□□□ 0.99
SHANK1-205ENST00000461154 AMIGO3Q86WK7 504 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 DNAJC10Q8IXB1 793 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
SHANK1-205ENST00000461154 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
SHANK1-205ENST00000461154 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
SHANK1-205ENST00000461154 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
SHANK1-205ENST00000461154 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
SHANK1-205ENST00000461154 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
SHANK1-205ENST00000461154 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms