RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 HTATSF1O43719 755 aaKnown RBP10.86□□□□□ -0.67
SND1-202ENST00000461056 DEFB132Q7Z7B7 95 aa10.86□□□□□ -0.67
SND1-202ENST00000461056 PAPPAQ13219 1627 aa10.86□□□□□ -0.67
SND1-202ENST00000461056 GNAT3A8MTJ3 354 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
SND1-202ENST00000461056 WDR43Q15061 677 aaKnown RBP eCLIP10.85□□□□□ -0.67
SND1-202ENST00000461056 CCDC146Q8IYE0 955 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 RUNDC1Q96C34 613 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 SLC52A2Q9HAB3 445 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 BTAF1O14981 1849 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 RREB1Q92766 1687 aa10.85□□□□□ -0.67
SND1-202ENST00000461056 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 APBA3O96018 575 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 C1orf141Q5JVX7 400 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 SCN11AQ9UI33 1791 aa10.84□□□□□ -0.67
SND1-202ENST00000461056 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
SND1-202ENST00000461056 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
SND1-202ENST00000461056 ASAP1Q9ULH1 1129 aa10.83□□□□□ -0.68
SND1-202ENST00000461056 CICQ96RK0 1608 aaPredicted RBP10.83□□□□□ -0.68
SND1-202ENST00000461056 SIPA1L3O60292 1781 aaPredicted RBP10.82□□□□□ -0.68
SND1-202ENST00000461056 PALLDQ8WX93 1383 aa10.82□□□□□ -0.68
SND1-202ENST00000461056 DCTN1Q14203 1278 aa10.82□□□□□ -0.68
SND1-202ENST00000461056 EZH2Q15910 746 aaKnown RBP10.82□□□□□ -0.68
SND1-202ENST00000461056 MCM10Q7L590 875 aa10.82□□□□□ -0.68
SND1-202ENST00000461056 NFATC2IPQ8NCF5 419 aa10.82□□□□□ -0.68
SND1-202ENST00000461056 PNNQ9H307 717 aaKnown RBP10.82□□□□□ -0.68
SND1-202ENST00000461056 TMOD3Q9NYL9 352 aa10.82□□□□□ -0.68
SND1-202ENST00000461056 ITGB4P16144 1822 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 APAF1O14727 1248 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 BAG6P46379 1132 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 THUMPD2Q9BTF0 503 aaKnown RBP10.81□□□□□ -0.68
SND1-202ENST00000461056 MAPK8IP3Q9UPT6 1336 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 LY75O60449 1722 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 NUP188Q5SRE5 1749 aa10.81□□□□□ -0.68
SND1-202ENST00000461056 HEG1Q9ULI3 1381 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 ZNF831Q5JPB2 1677 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 CABP4P57796 275 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 TXNRD1Q16881 649 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 SYTL4Q96C24 671 aaPredicted RBP10.8□□□□□ -0.68
SND1-202ENST00000461056 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
SND1-202ENST00000461056 RRP7AQ9Y3A4 280 aaKnown RBP10.8□□□□□ -0.68
SND1-202ENST00000461056 ZNF521Q96K83 1311 aa10.8□□□□□ -0.68
SND1-202ENST00000461056 RIPK4P57078 832 aa10.79□□□□□ -0.68
SND1-202ENST00000461056 ITPK1Q13572 414 aa10.79□□□□□ -0.68
SND1-202ENST00000461056 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
SND1-202ENST00000461056 UBR2Q8IWV8 1755 aa10.79□□□□□ -0.68
SND1-202ENST00000461056 LOC102724428A0A0B4J2F2 783 aa10.78□□□□□ -0.68
SND1-202ENST00000461056 KCNQ3O43525 872 aa10.78□□□□□ -0.68
SND1-202ENST00000461056 ZNF853P0CG23 659 aa10.78□□□□□ -0.68
SND1-202ENST00000461056 SIK1P57059 783 aa10.78□□□□□ -0.68
SND1-202ENST00000461056 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
SND1-202ENST00000461056 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
SND1-202ENST00000461056 KCNQ4P56696 695 aa10.77□□□□□ -0.69
SND1-202ENST00000461056 SLC39A6Q13433 755 aa10.77□□□□□ -0.69
SND1-202ENST00000461056 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.69
SND1-202ENST00000461056 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
SND1-202ENST00000461056 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
SND1-202ENST00000461056 DLG5Q8TDM6 1919 aa10.77□□□□□ -0.69
SND1-202ENST00000461056 C5P01031 1676 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 TJP1Q07157 1748 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 CHL1O00533 1208 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 TAF7Q15545 349 aaPredicted RBP10.76□□□□□ -0.69
SND1-202ENST00000461056 ZNF790Q6PG37 636 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 RTF1Q92541 710 aaKnown RBP10.76□□□□□ -0.69
SND1-202ENST00000461056 ZNF496Q96IT1 587 aaPredicted RBP10.76□□□□□ -0.69
SND1-202ENST00000461056 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
SND1-202ENST00000461056 ATF5Q9Y2D1 282 aaPredicted RBP10.76□□□□□ -0.69
SND1-202ENST00000461056 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
SND1-202ENST00000461056 TEFQ10587 303 aa10.75□□□□□ -0.69
SND1-202ENST00000461056 VSIG10Q8N0Z9 540 aa10.75□□□□□ -0.69
SND1-202ENST00000461056 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
SND1-202ENST00000461056 BTBD11A6QL63 1104 aa10.74□□□□□ -0.69
SND1-202ENST00000461056 NEFMP07197 916 aa10.74□□□□□ -0.69
SND1-202ENST00000461056 MIS18AQ9NYP9 233 aa10.74□□□□□ -0.69
SND1-202ENST00000461056 IL16Q14005 1332 aa10.74□□□□□ -0.69
SND1-202ENST00000461056 COL5A3P25940 1745 aaPredicted RBP10.73□□□□□ -0.69
SND1-202ENST00000461056 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
SND1-202ENST00000461056 EIF4A1P60842 406 aaKnown RBP10.73□□□□□ -0.69
SND1-202ENST00000461056 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
SND1-202ENST00000461056 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
SND1-202ENST00000461056 CNTNAP4Q9C0A0 1308 aa10.73□□□□□ -0.69
SND1-202ENST00000461056 C4BP0C0L5 1744 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 VIRMAQ69YN4 1812 aaKnown RBP10.72□□□□□ -0.69
SND1-202ENST00000461056 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 PRAMEF22A3QJZ6 481 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 CYP19A1P11511 503 aaPredicted RBP10.72□□□□□ -0.69
SND1-202ENST00000461056 SLC15A2Q16348 729 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 INTS5Q6P9B9 1019 aaKnown RBP10.72□□□□□ -0.69
SND1-202ENST00000461056 DNAJC10Q8IXB1 793 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 IFT57Q9NWB7 429 aa10.72□□□□□ -0.69
SND1-202ENST00000461056 RC3H1Q5TC82 1133 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms