RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
ERGIC3-211ENST00000461043 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.17
ERGIC3-211ENST00000461043 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
ERGIC3-211ENST00000461043 MAPK8IP3Q9UPT6 1336 aa16.08■□□□□ 0.16
ERGIC3-211ENST00000461043 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
ERGIC3-211ENST00000461043 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
ERGIC3-211ENST00000461043 ZNF831Q5JPB2 1677 aa16.07■□□□□ 0.16
ERGIC3-211ENST00000461043 NEFMP07197 916 aa16.06■□□□□ 0.16
ERGIC3-211ENST00000461043 CCDC146Q8IYE0 955 aa16.06■□□□□ 0.16
ERGIC3-211ENST00000461043 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
ERGIC3-211ENST00000461043 MCM10Q7L590 875 aa16.05■□□□□ 0.16
ERGIC3-211ENST00000461043 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
ERGIC3-211ENST00000461043 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-211ENST00000461043 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-211ENST00000461043 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
ERGIC3-211ENST00000461043 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
ERGIC3-211ENST00000461043 TMPOP42166 694 aaKnown RBP16.04■□□□□ 0.16
ERGIC3-211ENST00000461043 KCNQ4P56696 695 aa16.04■□□□□ 0.16
ERGIC3-211ENST00000461043 SIK1P57059 783 aa16.04■□□□□ 0.16
ERGIC3-211ENST00000461043 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 C5P01031 1676 aa16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
ERGIC3-211ENST00000461043 TEFQ10587 303 aa16.02■□□□□ 0.16
ERGIC3-211ENST00000461043 ITPK1Q13572 414 aa16.02■□□□□ 0.16
ERGIC3-211ENST00000461043 ZNF827Q17R98 1081 aa16.02■□□□□ 0.16
ERGIC3-211ENST00000461043 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
ERGIC3-211ENST00000461043 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
ERGIC3-211ENST00000461043 RIPK4P57078 832 aa16.01■□□□□ 0.15
ERGIC3-211ENST00000461043 SLC39A6Q13433 755 aa16.01■□□□□ 0.15
ERGIC3-211ENST00000461043 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
ERGIC3-211ENST00000461043 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
ERGIC3-211ENST00000461043 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
ERGIC3-211ENST00000461043 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
ERGIC3-211ENST00000461043 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
ERGIC3-211ENST00000461043 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 TJP1Q07157 1748 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 CASZ1Q86V15 1759 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
ERGIC3-211ENST00000461043 APAF1O14727 1248 aa15.98■□□□□ 0.15
ERGIC3-211ENST00000461043 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
ERGIC3-211ENST00000461043 HMGB2P26583 209 aaKnown RBP15.98■□□□□ 0.15
ERGIC3-211ENST00000461043 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
ERGIC3-211ENST00000461043 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
ERGIC3-211ENST00000461043 TUBGCP6Q96RT7 1819 aa15.97■□□□□ 0.15
ERGIC3-211ENST00000461043 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
ERGIC3-211ENST00000461043 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-211ENST00000461043 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
ERGIC3-211ENST00000461043 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
ERGIC3-211ENST00000461043 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
ERGIC3-211ENST00000461043 KCNQ3O43525 872 aa15.96■□□□□ 0.15
ERGIC3-211ENST00000461043 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-211ENST00000461043 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 AMIGO3Q86WK7 504 aa15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 PDGFDQ9GZP0 370 aaPredicted RBP15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
ERGIC3-211ENST00000461043 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
ERGIC3-211ENST00000461043 CNTNAP4Q9C0A0 1308 aa15.94■□□□□ 0.14
ERGIC3-211ENST00000461043 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
ERGIC3-211ENST00000461043 BABAM1Q9NWV8 329 aa15.94■□□□□ 0.14
ERGIC3-211ENST00000461043 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 MIER1Q8N108 512 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 MIS18AQ9NYP9 233 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
ERGIC3-211ENST00000461043 CYP19A1P11511 503 aaPredicted RBP15.92■□□□□ 0.14
ERGIC3-211ENST00000461043 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
ERGIC3-211ENST00000461043 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
ERGIC3-211ENST00000461043 INTS5Q6P9B9 1019 aaKnown RBP15.91■□□□□ 0.14
ERGIC3-211ENST00000461043 AK7Q96M32 723 aa15.91■□□□□ 0.14
ERGIC3-211ENST00000461043 CHL1O00533 1208 aa15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 ZNF853P0CG23 659 aa15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 SSFA2P28290 1259 aa15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 COL23A1Q86Y22 540 aaPredicted RBP15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 LRP5O75197 1615 aa15.9■□□□□ 0.14
ERGIC3-211ENST00000461043 GNPATO15228 680 aa15.89■□□□□ 0.13
ERGIC3-211ENST00000461043 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-211ENST00000461043 FLAD1Q8NFF5 587 aa15.89■□□□□ 0.13
ERGIC3-211ENST00000461043 TEX13AQ9BXU3 409 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-211ENST00000461043 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 CCDC87Q9NVE4 849 aa15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 TSPYL4Q9UJ04 414 aa15.88■□□□□ 0.13
ERGIC3-211ENST00000461043 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
ERGIC3-211ENST00000461043 STARD3NLO95772 234 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms