RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
SMARCD3-204ENST00000460431 FCHSD2O94868 740 aa22.01■■□□□ 1.11
SMARCD3-204ENST00000460431 CABP4P57796 275 aa22.01■■□□□ 1.11
SMARCD3-204ENST00000460431 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
SMARCD3-204ENST00000460431 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
SMARCD3-204ENST00000460431 HMGB2P26583 209 aaKnown RBP22■■□□□ 1.11
SMARCD3-204ENST00000460431 PRKAR2BP31323 418 aa22■■□□□ 1.11
SMARCD3-204ENST00000460431 YY1P25490 414 aa21.99■■□□□ 1.11
SMARCD3-204ENST00000460431 NFATC2IPQ8NCF5 419 aa21.99■■□□□ 1.11
SMARCD3-204ENST00000460431 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
SMARCD3-204ENST00000460431 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
SMARCD3-204ENST00000460431 QSER1Q2KHR3 1735 aa21.99■■□□□ 1.11
SMARCD3-204ENST00000460431 C5P01031 1676 aa21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 RNMTO43148 476 aaKnown RBP21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 SIK1P57059 783 aa21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 GAS2L2Q8NHY3 880 aa21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 ADAMTS7Q9UKP4 1686 aa21.98■■□□□ 1.11
SMARCD3-204ENST00000460431 TUBGCP6Q96RT7 1819 aa21.97■■□□□ 1.11
SMARCD3-204ENST00000460431 MYBBP1AQ9BQG0 1328 aaKnown RBP21.97■■□□□ 1.11
SMARCD3-204ENST00000460431 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
SMARCD3-204ENST00000460431 PRKRIP1Q9H875 184 aaPredicted RBP21.95■■□□□ 1.1
SMARCD3-204ENST00000460431 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
SMARCD3-204ENST00000460431 GNAT3A8MTJ3 354 aa21.94■■□□□ 1.1
SMARCD3-204ENST00000460431 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
SMARCD3-204ENST00000460431 MRC1P22897 1456 aa21.93■■□□□ 1.1
SMARCD3-204ENST00000460431 ATP6V1AP38606 617 aa21.93■■□□□ 1.1
SMARCD3-204ENST00000460431 ZNF831Q5JPB2 1677 aa21.93■■□□□ 1.1
SMARCD3-204ENST00000460431 C4BP0C0L5 1744 aa21.92■■□□□ 1.1
SMARCD3-204ENST00000460431 POLD1P28340 1107 aa21.92■■□□□ 1.1
SMARCD3-204ENST00000460431 IL17REQ8NFR9 667 aa21.92■■□□□ 1.1
SMARCD3-204ENST00000460431 ITPK1Q13572 414 aa21.91■■□□□ 1.1
SMARCD3-204ENST00000460431 SLC4A9Q96Q91 983 aa21.91■■□□□ 1.1
SMARCD3-204ENST00000460431 RBM42Q9BTD8 480 aaKnown RBP21.91■■□□□ 1.1
SMARCD3-204ENST00000460431 COL24A1Q17RW2 1714 aa21.91■■□□□ 1.1
SMARCD3-204ENST00000460431 LINC00116Q8NCU8 138 aa21.9■■□□□ 1.1
SMARCD3-204ENST00000460431 PLEKHF1Q96S99 279 aa21.89■■□□□ 1.09
SMARCD3-204ENST00000460431 UBR3Q6ZT12 1888 aa21.88■■□□□ 1.09
SMARCD3-204ENST00000460431 MSH5O43196 834 aa21.88■■□□□ 1.09
SMARCD3-204ENST00000460431 PTCD1O75127 700 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-204ENST00000460431 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
SMARCD3-204ENST00000460431 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-204ENST00000460431 AK7Q96M32 723 aa21.87■■□□□ 1.09
SMARCD3-204ENST00000460431 CEMIPQ8WUJ3 1361 aa21.87■■□□□ 1.09
SMARCD3-204ENST00000460431 DLG5Q8TDM6 1919 aa21.86■■□□□ 1.09
SMARCD3-204ENST00000460431 NEFMP07197 916 aa21.86■■□□□ 1.09
SMARCD3-204ENST00000460431 AMIGO3Q86WK7 504 aa21.86■■□□□ 1.09
SMARCD3-204ENST00000460431 FLAD1Q8NFF5 587 aa21.86■■□□□ 1.09
SMARCD3-204ENST00000460431 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 HTATSF1O43719 755 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 TEFQ10587 303 aa21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 SLC39A6Q13433 755 aa21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 KLHL34Q8N239 644 aa21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
SMARCD3-204ENST00000460431 MSL1Q68DK7 614 aa21.84■■□□□ 1.09
SMARCD3-204ENST00000460431 RC3H1Q5TC82 1133 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-204ENST00000460431 NLGN2Q8NFZ4 835 aa21.83■■□□□ 1.09
SMARCD3-204ENST00000460431 RTF1Q92541 710 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-204ENST00000460431 CICQ96RK0 1608 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-204ENST00000460431 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
SMARCD3-204ENST00000460431 TJP1Q07157 1748 aa21.81■■□□□ 1.08
SMARCD3-204ENST00000460431 SSFA2P28290 1259 aa21.81■■□□□ 1.08
SMARCD3-204ENST00000460431 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
SMARCD3-204ENST00000460431 MCM10Q7L590 875 aa21.81■■□□□ 1.08
SMARCD3-204ENST00000460431 UTRNP46939 3433 aa21.81■■□□□ 1.08
SMARCD3-204ENST00000460431 CNTNAP4Q9C0A0 1308 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 GNPATO15228 680 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 GPR162Q16538 588 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
SMARCD3-204ENST00000460431 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
SMARCD3-204ENST00000460431 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
SMARCD3-204ENST00000460431 PHF14O94880 888 aa21.78■■□□□ 1.08
SMARCD3-204ENST00000460431 TTC5Q8N0Z6 440 aa21.78■■□□□ 1.08
SMARCD3-204ENST00000460431 VSIG10Q8N0Z9 540 aa21.78■■□□□ 1.08
SMARCD3-204ENST00000460431 BTBD11A6QL63 1104 aa21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 RPS6KA4O75676 772 aa21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 WDR43Q15061 677 aaKnown RBP eCLIP21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 DNAJC10Q8IXB1 793 aa21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 RTCBQ9Y3I0 505 aaKnown RBP21.77■■□□□ 1.08
SMARCD3-204ENST00000460431 CRKLP46109 303 aaKnown RBP21.76■■□□□ 1.07
SMARCD3-204ENST00000460431 ZNF496Q96IT1 587 aaPredicted RBP21.76■■□□□ 1.07
SMARCD3-204ENST00000460431 ADAMTS8Q9UP79 889 aa21.76■■□□□ 1.07
SMARCD3-204ENST00000460431 TRAPPC3LQ5T215 181 aa21.75■■□□□ 1.07
SMARCD3-204ENST00000460431 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 ADRA2BP18089 450 aa21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 TAF7Q15545 349 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 INTS5Q6P9B9 1019 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 PELP1Q8IZL8 1130 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
SMARCD3-204ENST00000460431 ANP32CO43423 234 aa21.73■■□□□ 1.07
SMARCD3-204ENST00000460431 KCNQ3O43525 872 aa21.73■■□□□ 1.07
SMARCD3-204ENST00000460431 RUNDC1Q96C34 613 aa21.73■■□□□ 1.07
SMARCD3-204ENST00000460431 YBX3P16989 372 aaKnown RBP eCLIP21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
SMARCD3-204ENST00000460431 ARHGEF1Q92888 912 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms