RNA–Protein interactions for RNA: ENST00000460387.6

GCSAM-202, Transcript of germinal center associated signaling and motility, humanhuman

TSL 3 BASIC

Gene GCSAM, Length 623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-202ENST00000460387 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
GCSAM-202ENST00000460387 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
GCSAM-202ENST00000460387 NMRK2Q9NPI5 230 aa11.67□□□□□ -0.54
GCSAM-202ENST00000460387 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
GCSAM-202ENST00000460387 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
GCSAM-202ENST00000460387 TGFB2P61812 414 aa11.66□□□□□ -0.54
GCSAM-202ENST00000460387 IP6K1Q92551 441 aa11.66□□□□□ -0.54
GCSAM-202ENST00000460387 SMARCC1Q92922 1105 aaPredicted RBP11.66□□□□□ -0.54
GCSAM-202ENST00000460387 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
GCSAM-202ENST00000460387 HTRA3P83110 453 aa11.65□□□□□ -0.54
GCSAM-202ENST00000460387 RAPGEF4Q8WZA2 1011 aa11.65□□□□□ -0.54
GCSAM-202ENST00000460387 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
GCSAM-202ENST00000460387 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
GCSAM-202ENST00000460387 LTN1O94822 1766 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 PCNTO95613 3336 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
GCSAM-202ENST00000460387 SSFA2P28290 1259 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 AMPHP49418 695 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 NME9Q86XW9 330 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 NSD2O96028 1365 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
GCSAM-202ENST00000460387 FCHSD2O94868 740 aa11.63□□□□□ -0.55
GCSAM-202ENST00000460387 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
GCSAM-202ENST00000460387 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
GCSAM-202ENST00000460387 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
GCSAM-202ENST00000460387 C5P01031 1676 aa11.62□□□□□ -0.55
GCSAM-202ENST00000460387 FAM208AQ9UK61 1670 aaKnown RBP11.62□□□□□ -0.55
GCSAM-202ENST00000460387 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
GCSAM-202ENST00000460387 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
GCSAM-202ENST00000460387 SLC34A2O95436 690 aa11.61□□□□□ -0.55
GCSAM-202ENST00000460387 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
GCSAM-202ENST00000460387 RRAGCQ9HB90 399 aa11.61□□□□□ -0.55
GCSAM-202ENST00000460387 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
GCSAM-202ENST00000460387 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 MMP10P09238 476 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 NLGN1Q8N2Q7 840 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 CCDC87Q9NVE4 849 aa11.6□□□□□ -0.55
GCSAM-202ENST00000460387 COG3Q96JB2 828 aa11.59□□□□□ -0.55
GCSAM-202ENST00000460387 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
GCSAM-202ENST00000460387 GNPATO15228 680 aa11.58□□□□□ -0.56
GCSAM-202ENST00000460387 HOXC9P31274 260 aa11.58□□□□□ -0.56
GCSAM-202ENST00000460387 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
GCSAM-202ENST00000460387 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
GCSAM-202ENST00000460387 EDC4Q6P2E9 1401 aaKnown RBP11.58□□□□□ -0.56
GCSAM-202ENST00000460387 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
GCSAM-202ENST00000460387 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 TMF1P82094 1093 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 PIM2Q9P1W9 311 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 PARP3Q9Y6F1 533 aa11.57□□□□□ -0.56
GCSAM-202ENST00000460387 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
GCSAM-202ENST00000460387 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
GCSAM-202ENST00000460387 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
GCSAM-202ENST00000460387 PXDNLA1KZ92 1463 aa11.56□□□□□ -0.56
GCSAM-202ENST00000460387 C10orf71Q711Q0 1435 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 LOC102724428A0A0B4J2F2 783 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
GCSAM-202ENST00000460387 DPEP1P16444 411 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 SIK1P57059 783 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 DALRD3Q5D0E6 543 aaKnown RBP11.55□□□□□ -0.56
GCSAM-202ENST00000460387 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
GCSAM-202ENST00000460387 MAP3K19Q56UN5 1328 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 MEGF6O75095 1541 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
GCSAM-202ENST00000460387 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
GCSAM-202ENST00000460387 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
GCSAM-202ENST00000460387 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
GCSAM-202ENST00000460387 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 ST18O60284 1047 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 RFC4P35249 363 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 USHBP1Q8N6Y0 703 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
GCSAM-202ENST00000460387 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
GCSAM-202ENST00000460387 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.57
GCSAM-202ENST00000460387 AMIGO3Q86WK7 504 aa11.52□□□□□ -0.57
GCSAM-202ENST00000460387 LINC00116Q8NCU8 138 aa11.52□□□□□ -0.57
GCSAM-202ENST00000460387 PIGBQ92521 554 aa11.52□□□□□ -0.57
GCSAM-202ENST00000460387 SPG7Q9UQ90 795 aa11.52□□□□□ -0.57
GCSAM-202ENST00000460387 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.57
GCSAM-202ENST00000460387 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
GCSAM-202ENST00000460387 CD163L1Q9NR16 1453 aa11.51□□□□□ -0.57
GCSAM-202ENST00000460387 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
GCSAM-202ENST00000460387 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
GCSAM-202ENST00000460387 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
GCSAM-202ENST00000460387 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
GCSAM-202ENST00000460387 KIF13BQ9NQT8 1826 aa11.5□□□□□ -0.57
GCSAM-202ENST00000460387 GLTPD2A6NH11 291 aa11.49□□□□□ -0.57
GCSAM-202ENST00000460387 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
GCSAM-202ENST00000460387 CYP27B1O15528 508 aa11.49□□□□□ -0.57
GCSAM-202ENST00000460387 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms