RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
TNC-204ENST00000460345 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
TNC-204ENST00000460345 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
TNC-204ENST00000460345 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
TNC-204ENST00000460345 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
TNC-204ENST00000460345 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
TNC-204ENST00000460345 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
TNC-204ENST00000460345 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
TNC-204ENST00000460345 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
TNC-204ENST00000460345 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
TNC-204ENST00000460345 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
TNC-204ENST00000460345 THSD7AQ9UPZ6 1657 aa12.7□□□□□ -0.38
TNC-204ENST00000460345 ACSBG1Q96GR2 724 aa12.7□□□□□ -0.38
TNC-204ENST00000460345 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
TNC-204ENST00000460345 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
TNC-204ENST00000460345 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
TNC-204ENST00000460345 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
TNC-204ENST00000460345 KCNQ3O43525 872 aa12.69□□□□□ -0.38
TNC-204ENST00000460345 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
TNC-204ENST00000460345 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
TNC-204ENST00000460345 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
TNC-204ENST00000460345 FAM182BQ5T319 152 aa12.68□□□□□ -0.38
TNC-204ENST00000460345 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
TNC-204ENST00000460345 C8orf58Q8NAV2 365 aa12.68□□□□□ -0.38
TNC-204ENST00000460345 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
TNC-204ENST00000460345 MRC1P22897 1456 aa12.67□□□□□ -0.38
TNC-204ENST00000460345 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
TNC-204ENST00000460345 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
TNC-204ENST00000460345 ZNF790Q6PG37 636 aa12.67□□□□□ -0.38
TNC-204ENST00000460345 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
TNC-204ENST00000460345 PIGBQ92521 554 aa12.67□□□□□ -0.38
TNC-204ENST00000460345 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
TNC-204ENST00000460345 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
TNC-204ENST00000460345 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
TNC-204ENST00000460345 KCNQ2O43526 872 aa12.65□□□□□ -0.38
TNC-204ENST00000460345 VAMP4O75379 141 aa12.65□□□□□ -0.38
TNC-204ENST00000460345 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
TNC-204ENST00000460345 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 SUPT16HQ9Y5B9 1047 aaKnown RBP12.64□□□□□ -0.39
TNC-204ENST00000460345 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
TNC-204ENST00000460345 BCL9O00512 1426 aa12.63□□□□□ -0.39
TNC-204ENST00000460345 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
TNC-204ENST00000460345 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
TNC-204ENST00000460345 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
TNC-204ENST00000460345 RGS12O14924 1447 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 ITGB4P16144 1822 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 BRWD3Q6RI45 1802 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
TNC-204ENST00000460345 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
TNC-204ENST00000460345 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
TNC-204ENST00000460345 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
TNC-204ENST00000460345 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
TNC-204ENST00000460345 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
TNC-204ENST00000460345 BCAR3O75815 825 aa12.61□□□□□ -0.39
TNC-204ENST00000460345 HOXB7P09629 217 aa12.61□□□□□ -0.39
TNC-204ENST00000460345 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
TNC-204ENST00000460345 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
TNC-204ENST00000460345 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
TNC-204ENST00000460345 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
TNC-204ENST00000460345 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
TNC-204ENST00000460345 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
TNC-204ENST00000460345 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
TNC-204ENST00000460345 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
TNC-204ENST00000460345 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
TNC-204ENST00000460345 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
TNC-204ENST00000460345 HEG1Q9ULI3 1381 aa12.59□□□□□ -0.39
TNC-204ENST00000460345 TRIM37O94972 964 aa12.59□□□□□ -0.39
TNC-204ENST00000460345 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
TNC-204ENST00000460345 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
TNC-204ENST00000460345 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
TNC-204ENST00000460345 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
TNC-204ENST00000460345 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
TNC-204ENST00000460345 FRAT1Q92837 279 aaPredicted RBP12.58□□□□□ -0.4
TNC-204ENST00000460345 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
TNC-204ENST00000460345 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 PLIN1O60240 522 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 RRP1P56182 461 aaKnown RBP12.57□□□□□ -0.4
TNC-204ENST00000460345 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
TNC-204ENST00000460345 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
TNC-204ENST00000460345 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 SIK1P57059 783 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
TNC-204ENST00000460345 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
TNC-204ENST00000460345 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
TNC-204ENST00000460345 SBF2Q86WG5 1849 aa12.55□□□□□ -0.4
TNC-204ENST00000460345 IPO8O15397 1037 aaKnown RBP12.55□□□□□ -0.4
TNC-204ENST00000460345 STARD3NLO95772 234 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms