RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	GLTPD2	A6NH11	291 aa		12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	HMGB2	P26583	209 aa	Known RBP	12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	CLCN6	P51797	869 aa		12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	CDK19	Q9BWU1	502 aa		12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	VIRMA	Q69YN4	1812 aa	Known RBP	12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	C5	P01031	1676 aa		12.06	□□□□□ -0.48
NCSTN-209	ENST00000459963	DPEP1	P16444	411 aa		12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	MAP2K1	Q02750	393 aa	Predicted RBP	12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	AMIGO3	Q86WK7	504 aa		12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	DDX54	Q8TDD1	881 aa	Known RBP	12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	USP47	Q96K76	1375 aa		12.05	□□□□□ -0.48
NCSTN-209	ENST00000459963	DCAF5	Q96JK2	942 aa		12.04	□□□□□ -0.48
NCSTN-209	ENST00000459963	ARFGEF1	Q9Y6D6	1849 aa		12.03	□□□□□ -0.48
NCSTN-209	ENST00000459963	PHF14	O94880	888 aa		12.03	□□□□□ -0.48
NCSTN-209	ENST00000459963	MCOLN1	Q9GZU1	580 aa		12.03	□□□□□ -0.48
NCSTN-209	ENST00000459963	NLRP2	Q9NX02	1062 aa		12.03	□□□□□ -0.48
NCSTN-209	ENST00000459963	BRCA1	P38398	1863 aa	Known RBP	12.02	□□□□□ -0.48
NCSTN-209	ENST00000459963	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	POTEC	B2RU33	542 aa		12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	MMP10	P09238	476 aa		12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	KCNH5	Q8NCM2	988 aa		12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	AK7	Q96M32	723 aa		12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	DOT1L	Q8TEK3	1739 aa		12.02	□□□□□ -0.49
NCSTN-209	ENST00000459963	TOGARAM1	Q9Y4F4	1720 aa		12.01	□□□□□ -0.49
NCSTN-209	ENST00000459963	KCNA3	P22001	575 aa		12.01	□□□□□ -0.49
NCSTN-209	ENST00000459963	GCC1	Q96CN9	775 aa		12.01	□□□□□ -0.49
NCSTN-209	ENST00000459963	SBF1	O95248	1867 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	DLL1	O00548	723 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	SOX12	O15370	315 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	PASK	Q96RG2	1323 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	NSD3	Q9BZ95	1437 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	C4B	P0C0L5	1744 aa		12	□□□□□ -0.49
NCSTN-209	ENST00000459963	TMEM88B	A6NKF7	163 aa		11.99	□□□□□ -0.49
NCSTN-209	ENST00000459963	SSFA2	P28290	1259 aa		11.99	□□□□□ -0.49
NCSTN-209	ENST00000459963	DALRD3	Q5D0E6	543 aa	Known RBP	11.99	□□□□□ -0.49
NCSTN-209	ENST00000459963	PIM2	Q9P1W9	311 aa		11.99	□□□□□ -0.49
NCSTN-209	ENST00000459963	TAF1L	Q8IZX4	1826 aa		11.98	□□□□□ -0.49
NCSTN-209	ENST00000459963	KDM6A	O15550	1401 aa	Predicted RBP	11.98	□□□□□ -0.49
NCSTN-209	ENST00000459963	UBR3	Q6ZT12	1888 aa		11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	WDR33	Q9C0J8	1336 aa	Known RBP	11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	RASSF10	A6NK89	507 aa		11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	BEGAIN	Q9BUH8	593 aa		11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	CCDC87	Q9NVE4	849 aa		11.97	□□□□□ -0.49
NCSTN-209	ENST00000459963	DEFB115	Q30KQ5	88 aa		11.96	□□□□□ -0.49
NCSTN-209	ENST00000459963	HABP4	Q5JVS0	413 aa	Known RBP	11.96	□□□□□ -0.49
NCSTN-209	ENST00000459963	POTEI	P0CG38	1075 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	POTEJ	P0CG39	1038 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	LMNB1	P20700	586 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	SOX10	P56693	466 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	RASSF7	Q02833	373 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	PHF12	Q96QT6	1004 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	NFAT5	O94916	1531 aa		11.95	□□□□□ -0.5
NCSTN-209	ENST00000459963	PALLD	Q8WX93	1383 aa		11.94	□□□□□ -0.5
NCSTN-209	ENST00000459963	DGKZ	Q13574	1117 aa		11.94	□□□□□ -0.5
NCSTN-209	ENST00000459963	DCBLD2	Q96PD2	775 aa		11.94	□□□□□ -0.5
NCSTN-209	ENST00000459963	DPY19L2	Q6NUT2	758 aa		11.93	□□□□□ -0.5
NCSTN-209	ENST00000459963	ANKRD24	Q8TF21	1146 aa		11.92	□□□□□ -0.5
NCSTN-209	ENST00000459963	TSKS	Q9UJT2	592 aa		11.92	□□□□□ -0.5
NCSTN-209	ENST00000459963	NLGN1	Q8N2Q7	840 aa		11.91	□□□□□ -0.5
NCSTN-209	ENST00000459963	TIAM2	Q8IVF5	1701 aa		11.91	□□□□□ -0.5
NCSTN-209	ENST00000459963	THSD7B	Q9C0I4	1608 aa		11.9	□□□□□ -0.5
NCSTN-209	ENST00000459963	C4A	P0C0L4	1744 aa		11.9	□□□□□ -0.5
NCSTN-209	ENST00000459963	SRPK2	P78362	688 aa	Known RBP	11.9	□□□□□ -0.5
NCSTN-209	ENST00000459963	TMF1	P82094	1093 aa		11.9	□□□□□ -0.5
NCSTN-209	ENST00000459963	ITGBL1	O95965	494 aa	Predicted RBP	11.89	□□□□□ -0.51
NCSTN-209	ENST00000459963	LDHD	Q86WU2	507 aa		11.89	□□□□□ -0.51
NCSTN-209	ENST00000459963	CABP1	Q9NZU7	370 aa		11.89	□□□□□ -0.51
NCSTN-209	ENST00000459963	PARP3	Q9Y6F1	533 aa		11.89	□□□□□ -0.51
NCSTN-209	ENST00000459963	GNPAT	O15228	680 aa		11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	GALR2	O43603	387 aa	Predicted RBP	11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	NBPF15	Q8N660	670 aa		11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	LINC00116	Q8NCU8	138 aa		11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	ZCRB1	Q8TBF4	217 aa	Known RBP	11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	LTBP1	Q14766	1721 aa		11.88	□□□□□ -0.51
NCSTN-209	ENST00000459963	TTC21B	Q7Z4L5	1316 aa		11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	VASP	P50552	380 aa	Predicted RBP	11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	FXR1	P51114	621 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	RASEF	Q8IZ41	740 aa		11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	CABP2	Q9NPB3	220 aa		11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	ABT1	Q9ULW3	272 aa	Known RBP	11.87	□□□□□ -0.51
NCSTN-209	ENST00000459963	CA12	O43570	354 aa		11.86	□□□□□ -0.51
NCSTN-209	ENST00000459963	CHRNA5	P30532	468 aa		11.86	□□□□□ -0.51
NCSTN-209	ENST00000459963	SMARCC1	Q92922	1105 aa	Predicted RBP	11.86	□□□□□ -0.51
NCSTN-209	ENST00000459963	GPR101	Q96P66	508 aa	Predicted RBP	11.86	□□□□□ -0.51
NCSTN-209	ENST00000459963	ECE1	P42892	770 aa		11.85	□□□□□ -0.51
NCSTN-209	ENST00000459963	MPRIP	Q6WCQ1	1025 aa		11.85	□□□□□ -0.51
NCSTN-209	ENST00000459963	FAM212A	Q96EL1	285 aa		11.85	□□□□□ -0.51
NCSTN-209	ENST00000459963	CAPNS2	Q96L46	248 aa		11.85	□□□□□ -0.51
NCSTN-209	ENST00000459963	TTC21A	Q8NDW8	1320 aa		11.84	□□□□□ -0.51
NCSTN-209	ENST00000459963	CASP8AP2	Q9UKL3	1982 aa		11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	IQCA1L	A6NCM1	817 aa		11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	TRAPPC3L	Q5T215	181 aa		11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	SLC17A8	Q8NDX2	589 aa		11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	PITPNM2	Q9BZ72	1349 aa		11.83	□□□□□ -0.52
NCSTN-209	ENST00000459963	DDN	O94850	711 aa	Predicted RBP	11.82	□□□□□ -0.52
NCSTN-209	ENST00000459963	GYS1	P13807	737 aa		11.82	□□□□□ -0.52
NCSTN-209	ENST00000459963	GRM1	Q13255	1194 aa		11.82	□□□□□ -0.52

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