RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 CCDC61Q9Y6R9 512 aa5.96□□□□□ -1.46
RGPD6-206ENST00000459645 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
RGPD6-206ENST00000459645 ADGRB1O14514 1584 aa5.95□□□□□ -1.46
RGPD6-206ENST00000459645 AAMPQ13685 434 aa5.95□□□□□ -1.46
RGPD6-206ENST00000459645 SLC4A1APQ9BWU0 796 aaKnown RBP5.95□□□□□ -1.46
RGPD6-206ENST00000459645 KIAA1551Q9HCM1 1747 aa5.95□□□□□ -1.46
RGPD6-206ENST00000459645 PASKQ96RG2 1323 aa5.95□□□□□ -1.46
RGPD6-206ENST00000459645 PKD1L3Q7Z443 1732 aa5.94□□□□□ -1.46
RGPD6-206ENST00000459645 MAP2K1Q02750 393 aaPredicted RBP5.94□□□□□ -1.46
RGPD6-206ENST00000459645 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
RGPD6-206ENST00000459645 AK7Q96M32 723 aa5.94□□□□□ -1.46
RGPD6-206ENST00000459645 PIK3C2AO00443 1686 aa5.94□□□□□ -1.46
RGPD6-206ENST00000459645 USP47Q96K76 1375 aa5.93□□□□□ -1.46
RGPD6-206ENST00000459645 TMEM88BA6NKF7 163 aa5.93□□□□□ -1.46
RGPD6-206ENST00000459645 DALRD3Q5D0E6 543 aaKnown RBP5.93□□□□□ -1.46
RGPD6-206ENST00000459645 USP54Q70EL1 1684 aa5.93□□□□□ -1.46
RGPD6-206ENST00000459645 LY75O60449 1722 aa5.93□□□□□ -1.46
RGPD6-206ENST00000459645 WDR33Q9C0J8 1336 aaKnown RBP5.93□□□□□ -1.46
RGPD6-206ENST00000459645 N4BP2Q86UW6 1770 aaPredicted RBP5.93□□□□□ -1.46
RGPD6-206ENST00000459645 KDM6AO15550 1401 aaPredicted RBP5.92□□□□□ -1.46
RGPD6-206ENST00000459645 TOGARAM1Q9Y4F4 1720 aa5.92□□□□□ -1.46
RGPD6-206ENST00000459645 RASSF10A6NK89 507 aa5.92□□□□□ -1.46
RGPD6-206ENST00000459645 CLSTN1O94985 981 aa5.92□□□□□ -1.46
RGPD6-206ENST00000459645 DGKZQ13574 1117 aa5.92□□□□□ -1.46
RGPD6-206ENST00000459645 PIM2Q9P1W9 311 aa5.92□□□□□ -1.46
RGPD6-206ENST00000459645 ZNF219Q9P2Y4 722 aaPredicted RBP5.92□□□□□ -1.46
RGPD6-206ENST00000459645 ZC3H4Q9UPT8 1303 aaKnown RBP5.92□□□□□ -1.46
RGPD6-206ENST00000459645 KAT6BQ8WYB5 2073 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 ITGBL1O95965 494 aaPredicted RBP5.91□□□□□ -1.46
RGPD6-206ENST00000459645 LMNB1P20700 586 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 SSFA2P28290 1259 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 CHRNA5P30532 468 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 FXR1P51114 621 aaKnown RBP eCLIP5.91□□□□□ -1.46
RGPD6-206ENST00000459645 DEFB115Q30KQ5 88 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 PALLDQ8WX93 1383 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 ITSN1Q15811 1721 aa5.91□□□□□ -1.46
RGPD6-206ENST00000459645 SZT2Q5T011 3432 aa5.9□□□□□ -1.46
RGPD6-206ENST00000459645 KCNH5Q8NCM2 988 aa5.9□□□□□ -1.46
RGPD6-206ENST00000459645 LINC00116Q8NCU8 138 aa5.9□□□□□ -1.46
RGPD6-206ENST00000459645 ANKRD24Q8TF21 1146 aa5.9□□□□□ -1.46
RGPD6-206ENST00000459645 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
RGPD6-206ENST00000459645 NSD3Q9BZ95 1437 aa5.9□□□□□ -1.47
RGPD6-206ENST00000459645 NFAT5O94916 1531 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 C5P01031 1676 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 RGPD5Q99666 1765 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 GNPATO15228 680 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 GRM1Q13255 1194 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 GCC1Q96CN9 775 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 BEGAINQ9BUH8 593 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 CABP1Q9NZU7 370 aa5.89□□□□□ -1.47
RGPD6-206ENST00000459645 C4BP0C0L5 1744 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 DOT1LQ8TEK3 1739 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 VIRMAQ69YN4 1812 aaKnown RBP5.88□□□□□ -1.47
RGPD6-206ENST00000459645 KIF13BQ9NQT8 1826 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 AOC2O75106 756 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 TMF1P82094 1093 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 CAPNS2Q96L46 248 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 GPR101Q96P66 508 aaPredicted RBP5.88□□□□□ -1.47
RGPD6-206ENST00000459645 CABP2Q9NPB3 220 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 COL6A3P12111 3177 aa5.88□□□□□ -1.47
RGPD6-206ENST00000459645 NFKBIEO00221 500 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 DDNO94850 711 aaPredicted RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 NCLP19338 710 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 SRPK2P78362 688 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 SETQ01105 290 aaPredicted RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 ITPK1Q13572 414 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 CYP4F22Q6NT55 531 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 DPY19L2Q6NUT2 758 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 MPRIPQ6WCQ1 1025 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 LDHDQ86WU2 507 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 TICAM2Q86XR7 235 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 DHX37Q8IY37 1157 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 PIAS4Q8N2W9 510 aaPredicted RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 SLC17A8Q8NDX2 589 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 POLR3GLQ9BT43 218 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 ABT1Q9ULW3 272 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 TTC21BQ7Z4L5 1316 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 LTBP1Q14766 1721 aa5.87□□□□□ -1.47
RGPD6-206ENST00000459645 MKI67P46013 3256 aaKnown RBP5.87□□□□□ -1.47
RGPD6-206ENST00000459645 BRCA1P38398 1863 aaKnown RBP5.86□□□□□ -1.47
RGPD6-206ENST00000459645 GYS1P13807 737 aa5.86□□□□□ -1.47
RGPD6-206ENST00000459645 PTMSP20962 102 aa5.86□□□□□ -1.47
RGPD6-206ENST00000459645 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.47
RGPD6-206ENST00000459645 DDR1Q08345 913 aa5.86□□□□□ -1.47
RGPD6-206ENST00000459645 PAXIP1Q6ZW49 1069 aaPredicted RBP5.86□□□□□ -1.47
RGPD6-206ENST00000459645 NBPF15Q8N660 670 aa5.86□□□□□ -1.47
RGPD6-206ENST00000459645 LTV1Q96GA3 475 aaPredicted RBP5.86□□□□□ -1.47
RGPD6-206ENST00000459645 TAF1DQ9H5J8 278 aaPredicted RBP5.86□□□□□ -1.47
RGPD6-206ENST00000459645 PARP3Q9Y6F1 533 aa5.86□□□□□ -1.47
RGPD6-206ENST00000459645 UBR3Q6ZT12 1888 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 ARFGEF1Q9Y6D6 1849 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 MEGF6O75095 1541 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 NEFMP07197 916 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 EAPPQ56P03 285 aaPredicted RBP5.85□□□□□ -1.47
RGPD6-206ENST00000459645 MAP1SQ66K74 1059 aaPredicted RBP5.85□□□□□ -1.47
RGPD6-206ENST00000459645 KDM2AQ9Y2K7 1162 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 SBF1O95248 1867 aa5.85□□□□□ -1.47
RGPD6-206ENST00000459645 TRIOBPQ9H2D6 2365 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms