RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
GPHN-202ENST00000459628 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
GPHN-202ENST00000459628 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
GPHN-202ENST00000459628 TEFQ10587 303 aa16.67■□□□□ 0.26
GPHN-202ENST00000459628 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
GPHN-202ENST00000459628 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
GPHN-202ENST00000459628 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
GPHN-202ENST00000459628 PIGBQ92521 554 aa16.65■□□□□ 0.26
GPHN-202ENST00000459628 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
GPHN-202ENST00000459628 PAPPAQ13219 1627 aa16.64■□□□□ 0.26
GPHN-202ENST00000459628 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
GPHN-202ENST00000459628 KDM3BQ7LBC6 1761 aa16.63■□□□□ 0.25
GPHN-202ENST00000459628 WWC1Q8IX03 1113 aa16.62■□□□□ 0.25
GPHN-202ENST00000459628 APBA3O96018 575 aa16.62■□□□□ 0.25
GPHN-202ENST00000459628 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
GPHN-202ENST00000459628 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
GPHN-202ENST00000459628 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
GPHN-202ENST00000459628 SF3B2Q13435 895 aaKnown RBP16.61■□□□□ 0.25
GPHN-202ENST00000459628 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
GPHN-202ENST00000459628 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
GPHN-202ENST00000459628 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
GPHN-202ENST00000459628 LY75O60449 1722 aa16.6■□□□□ 0.25
GPHN-202ENST00000459628 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
GPHN-202ENST00000459628 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
GPHN-202ENST00000459628 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
GPHN-202ENST00000459628 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■■ 27.9
GPHN-202ENST00000459628 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
GPHN-202ENST00000459628 KCNQ3O43525 872 aa16.58■□□□□ 0.24
GPHN-202ENST00000459628 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
GPHN-202ENST00000459628 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
GPHN-202ENST00000459628 RGPD3A6NKT7 1758 aaPredicted RBP16.58■□□□□ 0.24
GPHN-202ENST00000459628 RGPD4Q7Z3J3 1758 aa16.58■□□□□ 0.24
GPHN-202ENST00000459628 CALD1Q05682 793 aaKnown RBP16.57■□□□□ 0.24
GPHN-202ENST00000459628 DEFB132Q7Z7B7 95 aa16.57■□□□□ 0.24
GPHN-202ENST00000459628 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
GPHN-202ENST00000459628 KCPQ6ZWJ8 1503 aa16.57■□□□□ 0.24
GPHN-202ENST00000459628 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
GPHN-202ENST00000459628 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
GPHN-202ENST00000459628 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
GPHN-202ENST00000459628 BAG6P46379 1132 aa16.56■□□□□ 0.24
GPHN-202ENST00000459628 EN1Q05925 392 aaPredicted RBP16.56■□□□□ 0.24
GPHN-202ENST00000459628 ZNF790Q6PG37 636 aa16.56■□□□□ 0.24
GPHN-202ENST00000459628 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
GPHN-202ENST00000459628 C5P01031 1676 aa16.55■□□□□ 0.24
GPHN-202ENST00000459628 KCNQ4P56696 695 aa16.55■□□□□ 0.24
GPHN-202ENST00000459628 WDR63Q8IWG1 891 aa16.55■□□□□ 0.24
GPHN-202ENST00000459628 TJP1Q07157 1748 aa16.55■□□□□ 0.24
GPHN-202ENST00000459628 TAF1LQ8IZX4 1826 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 GNAI1P63096 354 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 CCDC125Q86Z20 511 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
GPHN-202ENST00000459628 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 RREB1Q92766 1687 aa16.54■□□□□ 0.24
GPHN-202ENST00000459628 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
GPHN-202ENST00000459628 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
GPHN-202ENST00000459628 CHL1O00533 1208 aa16.53■□□□□ 0.24
GPHN-202ENST00000459628 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
GPHN-202ENST00000459628 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
GPHN-202ENST00000459628 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
GPHN-202ENST00000459628 IL16Q14005 1332 aa16.52■□□□□ 0.24
GPHN-202ENST00000459628 ZBED9Q6R2W3 1325 aa16.52■□□□□ 0.24
GPHN-202ENST00000459628 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
GPHN-202ENST00000459628 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
GPHN-202ENST00000459628 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.24
GPHN-202ENST00000459628 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
GPHN-202ENST00000459628 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 PLSCR1O15162 318 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 SIK1P57059 783 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 TXNRD1Q16881 649 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
GPHN-202ENST00000459628 FANCIQ9NVI1 1328 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 ZNF831Q5JPB2 1677 aa16.51■□□□□ 0.23
GPHN-202ENST00000459628 SLC4A9Q96Q91 983 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
GPHN-202ENST00000459628 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 CAMKK2Q96RR4 588 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
GPHN-202ENST00000459628 PROM2Q8N271 834 aa16.49■□□□□ 0.23
GPHN-202ENST00000459628 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
GPHN-202ENST00000459628 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
GPHN-202ENST00000459628 CICQ96RK0 1608 aaPredicted RBP16.49■□□□□ 0.23
GPHN-202ENST00000459628 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
GPHN-202ENST00000459628 ITPK1Q13572 414 aa16.48■□□□□ 0.23
GPHN-202ENST00000459628 E9PSI1 815 aa16.48■□□□□ 0.23
GPHN-202ENST00000459628 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
GPHN-202ENST00000459628 C4BP0C0L5 1744 aa16.47■□□□□ 0.23
GPHN-202ENST00000459628 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
GPHN-202ENST00000459628 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
GPHN-202ENST00000459628 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
GPHN-202ENST00000459628 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.23
GPHN-202ENST00000459628 MYH14Q7Z406 1995 aaKnown RBP16.46■□□□□ 0.23
GPHN-202ENST00000459628 TUBGCP6Q96RT7 1819 aa16.46■□□□□ 0.23
GPHN-202ENST00000459628 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
GPHN-202ENST00000459628 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
GPHN-202ENST00000459628 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms