RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
DDX39B-214ENST00000458640 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
DDX39B-214ENST00000458640 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
DDX39B-214ENST00000458640 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
DDX39B-214ENST00000458640 TULP2O00295 520 aa13.88□□□□□ -0.19
DDX39B-214ENST00000458640 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
DDX39B-214ENST00000458640 GEMIN8Q9NWZ8 242 aaKnown RBP13.88□□□□□ -0.19
DDX39B-214ENST00000458640 MSH6P52701 1360 aa13.87□□□□□ -0.19
DDX39B-214ENST00000458640 RRP7AQ9Y3A4 280 aaKnown RBP13.87□□□□□ -0.19
DDX39B-214ENST00000458640 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
DDX39B-214ENST00000458640 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
DDX39B-214ENST00000458640 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
DDX39B-214ENST00000458640 SYCP1Q15431 976 aa13.86□□□□□ -0.19
DDX39B-214ENST00000458640 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
DDX39B-214ENST00000458640 RTL1A6NKG5 1358 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 MST1RQ04912 1400 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 TRPM3Q9HCF6 1732 aaPredicted RBP13.85□□□□□ -0.19
DDX39B-214ENST00000458640 SOX12O15370 315 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 KCNJ4P48050 445 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 ARID3AQ99856 593 aa13.85□□□□□ -0.19
DDX39B-214ENST00000458640 LTN1O94822 1766 aa13.84□□□□□ -0.19
DDX39B-214ENST00000458640 IGHDP01880 384 aa13.84□□□□□ -0.19
DDX39B-214ENST00000458640 AMPHP49418 695 aa13.84□□□□□ -0.19
DDX39B-214ENST00000458640 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
DDX39B-214ENST00000458640 ZNF622Q969S3 477 aaKnown RBP eCLIP13.84□□□□□ -0.194e-14■□□□□ 11.2
DDX39B-214ENST00000458640 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
DDX39B-214ENST00000458640 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
DDX39B-214ENST00000458640 KCNH5Q8NCM2 988 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 ORAI2Q96SN7 254 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
DDX39B-214ENST00000458640 PHRF1Q9P1Y6 1649 aaKnown RBP13.83□□□□□ -0.2
DDX39B-214ENST00000458640 HMOX1P09601 288 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 DDX49Q9Y6V7 483 aaKnown RBP13.83□□□□□ -0.2
DDX39B-214ENST00000458640 IL16Q14005 1332 aa13.83□□□□□ -0.2
DDX39B-214ENST00000458640 LMOD3Q0VAK6 560 aa13.82□□□□□ -0.2
DDX39B-214ENST00000458640 NFAT5O94916 1531 aa13.82□□□□□ -0.2
DDX39B-214ENST00000458640 FOXO3O43524 673 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 CHMP4AQ9BY43 222 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
DDX39B-214ENST00000458640 SLIT3O75094 1523 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 NUTM2GQ5VZR2 741 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 DMRT2Q9Y5R5 561 aa13.81□□□□□ -0.2
DDX39B-214ENST00000458640 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
DDX39B-214ENST00000458640 ALS2Q96Q42 1657 aa13.8□□□□□ -0.2
DDX39B-214ENST00000458640 CTR9Q6PD62 1173 aa13.8□□□□□ -0.2
DDX39B-214ENST00000458640 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
DDX39B-214ENST00000458640 SLFN14P0C7P3 912 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 BCL2L12Q9HB09 334 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
DDX39B-214ENST00000458640 MFAP1P55081 439 aaKnown RBP13.78□□□□□ -0.2
DDX39B-214ENST00000458640 SULT6B1Q6IMI4 303 aa13.78□□□□□ -0.2
DDX39B-214ENST00000458640 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
DDX39B-214ENST00000458640 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
DDX39B-214ENST00000458640 HOXC9P31274 260 aa13.78□□□□□ -0.2
DDX39B-214ENST00000458640 CHAF1AQ13111 956 aaPredicted RBP13.78□□□□□ -0.2
DDX39B-214ENST00000458640 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
DDX39B-214ENST00000458640 KDRP35968 1356 aa13.77□□□□□ -0.2
DDX39B-214ENST00000458640 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
DDX39B-214ENST00000458640 RBSNQ9H1K0 784 aa13.77□□□□□ -0.21
DDX39B-214ENST00000458640 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
DDX39B-214ENST00000458640 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.21
DDX39B-214ENST00000458640 LRSAM1Q6UWE0 723 aa13.76□□□□□ -0.21
DDX39B-214ENST00000458640 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
DDX39B-214ENST00000458640 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-214ENST00000458640 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-214ENST00000458640 ZBTB22O15209 634 aa13.76□□□□□ -0.21
DDX39B-214ENST00000458640 PSEN1P49768 467 aa13.76□□□□□ -0.21
DDX39B-214ENST00000458640 NOLC1Q14978 699 aaKnown RBP eCLIP13.76□□□□□ -0.211e-9■■■■■ 32.2
DDX39B-214ENST00000458640 MORC2Q9Y6X9 1032 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-214ENST00000458640 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
DDX39B-214ENST00000458640 BAG4O95429 457 aaKnown RBP13.74□□□□□ -0.21
DDX39B-214ENST00000458640 NUCB2P80303 420 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 TERF2Q15554 542 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 IP6K1Q92551 441 aa13.74□□□□□ -0.21
DDX39B-214ENST00000458640 GCP02774 474 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 DHX37Q8IY37 1157 aaKnown RBP13.73□□□□□ -0.21
DDX39B-214ENST00000458640 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
DDX39B-214ENST00000458640 PXDNQ92626 1479 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 PTMAP06454 111 aaKnown RBP13.73□□□□□ -0.21
DDX39B-214ENST00000458640 TPM3P06753 285 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
DDX39B-214ENST00000458640 GNAI1P63096 354 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 HOMEZQ8IX15 550 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 EYA1Q99502 592 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
DDX39B-214ENST00000458640 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms