RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 KCNQ4P56696 695 aa9.41□□□□□ -0.9
GAPDHP53-201ENST00000458397 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
GAPDHP53-201ENST00000458397 SMARCC1Q92922 1105 aaPredicted RBP9.41□□□□□ -0.9
GAPDHP53-201ENST00000458397 ZNF831Q5JPB2 1677 aa9.41□□□□□ -0.9
GAPDHP53-201ENST00000458397 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 HTATSF1O43719 755 aaKnown RBP9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 CABP4P57796 275 aa9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 ZNF827Q17R98 1081 aa9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 AKT1S1Q96B36 256 aa9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 UTRNP46939 3433 aa9.4□□□□□ -0.9
GAPDHP53-201ENST00000458397 UBR2Q8IWV8 1755 aa9.4□□□□□ -0.91
GAPDHP53-201ENST00000458397 LOC102724428A0A0B4J2F2 783 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 TMPOP42166 694 aaKnown RBP9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 SIK1P57059 783 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 ITPK1Q13572 414 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 DCTN1Q14203 1278 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 MCM10Q7L590 875 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 CCDC146Q8IYE0 955 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 RUNDC1Q96C34 613 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 PNNQ9H307 717 aaKnown RBP9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 CCNL1Q9UK58 526 aaPredicted RBP9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 C5P01031 1676 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 DLG5Q8TDM6 1919 aa9.39□□□□□ -0.91
GAPDHP53-201ENST00000458397 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 CASZ1Q86V15 1759 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 SLC15A2Q16348 729 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 MRS2Q9HD23 443 aa9.38□□□□□ -0.91
GAPDHP53-201ENST00000458397 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 TJP1Q07157 1748 aa9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 PDGFDQ9GZP0 370 aaPredicted RBP9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 TUBGCP6Q96RT7 1819 aa9.37□□□□□ -0.91
GAPDHP53-201ENST00000458397 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 KCNQ3O43525 872 aa9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 RIPK4P57078 832 aa9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
GAPDHP53-201ENST00000458397 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 APAF1O14727 1248 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 TEFQ10587 303 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 ZNF790Q6PG37 636 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 ZNF496Q96IT1 587 aaPredicted RBP9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 STK32BQ9NY57 414 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 HEG1Q9ULI3 1381 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
GAPDHP53-201ENST00000458397 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 CCER2I3L3R5 266 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 NEFMP07197 916 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 TAF7Q15545 349 aaPredicted RBP9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 DIEXFQ68CQ4 756 aaKnown RBP9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 VSIG10Q8N0Z9 540 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 UBR3Q6ZT12 1888 aa9.34□□□□□ -0.91
GAPDHP53-201ENST00000458397 MYH14Q7Z406 1995 aaKnown RBP9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 BTBD11A6QL63 1104 aa9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 NCBP3Q53F19 620 aaKnown RBP9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 DNAJC10Q8IXB1 793 aa9.33□□□□□ -0.92
GAPDHP53-201ENST00000458397 COL24A1Q17RW2 1714 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 ZNF853P0CG23 659 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 CYP19A1P11511 503 aaPredicted RBP9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 MIS18AQ9NYP9 233 aa9.32□□□□□ -0.92
GAPDHP53-201ENST00000458397 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 CHL1O00533 1208 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 SSFA2P28290 1259 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 MIER1Q8N108 512 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 TFCP2L1Q9NZI6 479 aa9.31□□□□□ -0.92
GAPDHP53-201ENST00000458397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 GNPATO15228 680 aa9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 HMGB2P26583 209 aaKnown RBP9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 PTGER2P43116 358 aa9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 TTC5Q8N0Z6 440 aa9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 AK7Q96M32 723 aa9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 GOLGB1Q14789 3259 aaKnown RBP9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 ZNF521Q96K83 1311 aa9.3□□□□□ -0.92
GAPDHP53-201ENST00000458397 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms