RNA–Protein interactions for RNA: ENST00000457647.2

RGPD4-AS1-202, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 1 (best) BASIC

Gene RGPD4-AS1, Length 1,792 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-202ENST00000457647 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 CABP4P57796 275 aa16.53■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 TEFQ10587 303 aa16.53■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 ILDR2Q71H61 639 aa16.53■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 PIGBQ92521 554 aa16.52■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.24
RGPD4-AS1-202ENST00000457647 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 KCNQ3O43525 872 aa16.51■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TRIM37O94972 964 aa16.5■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 ZNF853P0CG23 659 aa16.5■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 IL16Q14005 1332 aa16.48■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 CHL1O00533 1208 aa16.48■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TNS1Q9HBL0 1735 aaKnown RBP16.47■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 SLFN5Q08AF3 891 aa16.46■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
RGPD4-AS1-202ENST00000457647 GNAI1P63096 354 aa16.46■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 KRT24Q2M2I5 525 aa16.46■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 ATG3Q9NT62 314 aa16.46■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 E9PSI1 815 aa16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 ZNF496Q96IT1 587 aaPredicted RBP16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 C5P01031 1676 aa16.43■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 LY75O60449 1722 aa16.42■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 MYH16Q9H6N6 1097 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 KCNQ4P56696 695 aa16.4■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 TJP1Q07157 1748 aa16.4■□□□□ 0.22
RGPD4-AS1-202ENST00000457647 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 APBA3O96018 575 aa16.38■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 SIK1P57059 783 aa16.37■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 ITPK1Q13572 414 aa16.36■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 PROM2Q8N271 834 aa16.36■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 DEFB132Q7Z7B7 95 aa16.35■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 LRRC4BQ9NT99 713 aa16.35■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 ZNF831Q5JPB2 1677 aa16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 EN1Q05925 392 aaPredicted RBP16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 RGPD3A6NKT7 1758 aaPredicted RBP16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 RGPD4Q7Z3J3 1758 aa16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 ATP6V1AP38606 617 aa16.33■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.21
RGPD4-AS1-202ENST00000457647 PLSCR1O15162 318 aa16.33■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 VAMP4O75379 141 aa16.33■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 RREB1Q92766 1687 aa16.3■□□□□ 0.2
RGPD4-AS1-202ENST00000457647 A1BGP04217 495 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms