RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 IL2RBP14784 551 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 AK7Q96M32 723 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 MYL6BP14649 208 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 TRIM29Q14134 588 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 ABCC11Q96J66 1382 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZPR1O75312 459 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 ATP2B1P20020 1258 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 PRAG1Q86YV5 1406 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 FYB1O15117 783 aa11.61□□□□□ -0.55
MSC-AS1-201ENST00000457356 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 G3BP1Q13283 466 aaKnown RBP eCLIP11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 RXRBP28702 533 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 DISP3Q9P2K9 1392 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 KINO60870 393 aaKnown RBP11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 FCHSD2O94868 740 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 CWC15Q9P013 229 aaKnown RBP11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 TRPC5Q9UL62 973 aaPredicted RBP11.6□□□□□ -0.55
MSC-AS1-201ENST00000457356 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 CHMP4CQ96CF2 233 aa11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 NAP1L1P55209 391 aaKnown RBP11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 CWC22Q9HCG8 908 aaKnown RBP11.59□□□□□ -0.55
MSC-AS1-201ENST00000457356 ABCC3O15438 1527 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 LETM1O95202 739 aaPredicted RBP11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 GLI2P10070 1586 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 MCM2P49736 904 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 PLEKHH1Q9ULM0 1364 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 TRDNQ13061 729 aa11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
MSC-AS1-201ENST00000457356 BAG6P46379 1132 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 MCM10Q7L590 875 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 ATF7IPQ6VMQ6 1270 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 DHX37Q8IY37 1157 aaKnown RBP11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 LEKR1Q6ZMV7 388 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 NEUROD6Q96NK8 337 aa11.57□□□□□ -0.56
MSC-AS1-201ENST00000457356 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 TSPYL1Q9H0U9 437 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 ERC2O15083 957 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 UBTFL1P0CB47 393 aaPredicted RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 STK3Q13188 491 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 CLASRPQ8N2M8 674 aaKnown RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 TNMDQ9H2S6 317 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 SSFA2P28290 1259 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 HSPA1LP34931 641 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 BRINP3Q76B58 766 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 TFCP2L1Q9NZI6 479 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 PDCP20941 246 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 TNPO1Q92973 898 aaKnown RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 HOOK1Q9UJC3 728 aaKnown RBP11.56□□□□□ -0.56
MSC-AS1-201ENST00000457356 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 TWISTNBQ3B726 338 aaPredicted RBP11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 FERMT3Q86UX7 667 aa11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 CDCA7Q9BWT1 371 aaPredicted RBP11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
MSC-AS1-201ENST00000457356 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 APBA3O96018 575 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 RFC4P35249 363 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 NFE2L2Q16236 605 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 MAP4K4O95819 1239 aaPredicted RBP11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 USP25Q9UHP3 1055 aa11.54□□□□□ -0.56
MSC-AS1-201ENST00000457356 SLFN5Q08AF3 891 aa11.53□□□□□ -0.56
MSC-AS1-201ENST00000457356 CAGE1Q8TC20 777 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms