RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 TEFQ10587 303 aa21.18■□□□□ 0.98
PKNOX1-204ENST00000456957 UBR2Q8IWV8 1755 aa21.18■□□□□ 0.98
PKNOX1-204ENST00000456957 CABP4P57796 275 aa21.17■□□□□ 0.98
PKNOX1-204ENST00000456957 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
PKNOX1-204ENST00000456957 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
PKNOX1-204ENST00000456957 WDR63Q8IWG1 891 aa21.16■□□□□ 0.98
PKNOX1-204ENST00000456957 NFATC2IPQ8NCF5 419 aa21.16■□□□□ 0.98
PKNOX1-204ENST00000456957 SYTL4Q96C24 671 aaPredicted RBP21.16■□□□□ 0.98
PKNOX1-204ENST00000456957 KCNQ2O43526 872 aa21.15■□□□□ 0.98
PKNOX1-204ENST00000456957 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
PKNOX1-204ENST00000456957 IL16Q14005 1332 aa21.14■□□□□ 0.97
PKNOX1-204ENST00000456957 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
PKNOX1-204ENST00000456957 PTF1AQ7RTS3 328 aa21.13■□□□□ 0.97
PKNOX1-204ENST00000456957 PIGBQ92521 554 aa21.13■□□□□ 0.97
PKNOX1-204ENST00000456957 SPINK5Q9NQ38 1064 aaPredicted RBP21.13■□□□□ 0.97
PKNOX1-204ENST00000456957 ZNF853P0CG23 659 aa21.12■□□□□ 0.97
PKNOX1-204ENST00000456957 GOLGA2Q08379 1002 aa21.12■□□□□ 0.97
PKNOX1-204ENST00000456957 CCDC125Q86Z20 511 aa21.12■□□□□ 0.97
PKNOX1-204ENST00000456957 IFT57Q9NWB7 429 aa21.12■□□□□ 0.97
PKNOX1-204ENST00000456957 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
PKNOX1-204ENST00000456957 CFAP44Q96MT7 982 aa21.11■□□□□ 0.97
PKNOX1-204ENST00000456957 MIS18AQ9NYP9 233 aa21.11■□□□□ 0.97
PKNOX1-204ENST00000456957 LY75O60449 1722 aa21.11■□□□□ 0.97
PKNOX1-204ENST00000456957 KCPQ6ZWJ8 1503 aa21.1■□□□□ 0.97
PKNOX1-204ENST00000456957 BTBD11A6QL63 1104 aa21.1■□□□□ 0.97
PKNOX1-204ENST00000456957 CHL1O00533 1208 aa21.1■□□□□ 0.97
PKNOX1-204ENST00000456957 GNAI1P63096 354 aa21.1■□□□□ 0.97
PKNOX1-204ENST00000456957 CDCA7LQ96GN5 454 aa21.1■□□□□ 0.97
PKNOX1-204ENST00000456957 TRIM37O94972 964 aa21.09■□□□□ 0.97
PKNOX1-204ENST00000456957 BCL11BQ9C0K0 894 aaPredicted RBP21.09■□□□□ 0.97
PKNOX1-204ENST00000456957 BABAM1Q9NWV8 329 aa21.09■□□□□ 0.97
PKNOX1-204ENST00000456957 EP400Q96L91 3159 aa21.09■□□□□ 0.97
PKNOX1-204ENST00000456957 C5P01031 1676 aa21.09■□□□□ 0.97
PKNOX1-204ENST00000456957 SRCAPQ6ZRS2 3230 aa21.08■□□□□ 0.97
PKNOX1-204ENST00000456957 SLC39A6Q13433 755 aa21.08■□□□□ 0.97
PKNOX1-204ENST00000456957 MBIPQ9NS73 344 aa21.08■□□□□ 0.97
PKNOX1-204ENST00000456957 TSPYL4Q9UJ04 414 aa21.08■□□□□ 0.97
PKNOX1-204ENST00000456957 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.96
PKNOX1-204ENST00000456957 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.96
PKNOX1-204ENST00000456957 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 E9PSI1 815 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 KCNQ3O43525 872 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 TSR2Q969E8 191 aaKnown RBP21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 ATG3Q9NT62 314 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
PKNOX1-204ENST00000456957 ZNF831Q5JPB2 1677 aa21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 LAMB4A4D0S4 1761 aa21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 ZNF790Q6PG37 636 aa21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 CICQ96RK0 1608 aaPredicted RBP21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 TJP1Q07157 1748 aa21.06■□□□□ 0.96
PKNOX1-204ENST00000456957 TRMT2AQ8IZ69 625 aaKnown RBP21.04■□□□□ 0.96
PKNOX1-204ENST00000456957 TTC5Q8N0Z6 440 aa21.04■□□□□ 0.96
PKNOX1-204ENST00000456957 PALLDQ8WX93 1383 aa21.04■□□□□ 0.96
PKNOX1-204ENST00000456957 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
PKNOX1-204ENST00000456957 COL5A3P25940 1745 aaPredicted RBP21.02■□□□□ 0.96
PKNOX1-204ENST00000456957 EIF4A1P60842 406 aaKnown RBP21.01■□□□□ 0.95
PKNOX1-204ENST00000456957 DUSP27Q5VZP5 1158 aa21.01■□□□□ 0.95
PKNOX1-204ENST00000456957 SMARCC1Q92922 1105 aaPredicted RBP21.01■□□□□ 0.95
PKNOX1-204ENST00000456957 ZNF496Q96IT1 587 aaPredicted RBP21.01■□□□□ 0.95
PKNOX1-204ENST00000456957 HEG1Q9ULI3 1381 aa21■□□□□ 0.95
PKNOX1-204ENST00000456957 PTCD1O75127 700 aaKnown RBP21■□□□□ 0.95
PKNOX1-204ENST00000456957 KRT24Q2M2I5 525 aa20.99■□□□□ 0.95
PKNOX1-204ENST00000456957 FMNL2Q96PY5 1086 aa20.99■□□□□ 0.95
PKNOX1-204ENST00000456957 RREB1Q92766 1687 aa20.99■□□□□ 0.95
PKNOX1-204ENST00000456957 APBA3O96018 575 aa20.98■□□□□ 0.95
PKNOX1-204ENST00000456957 EXOSC9Q06265 439 aaKnown RBP20.98■□□□□ 0.95
PKNOX1-204ENST00000456957 RBM42Q9BTD8 480 aaKnown RBP20.98■□□□□ 0.95
PKNOX1-204ENST00000456957 C8orf58Q8NAV2 365 aa20.97■□□□□ 0.95
PKNOX1-204ENST00000456957 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
PKNOX1-204ENST00000456957 LOC102724428A0A0B4J2F2 783 aa20.95■□□□□ 0.94
PKNOX1-204ENST00000456957 SIK1P57059 783 aa20.95■□□□□ 0.94
PKNOX1-204ENST00000456957 TSPYL6Q8N831 410 aa20.95■□□□□ 0.94
PKNOX1-204ENST00000456957 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
PKNOX1-204ENST00000456957 PLSCR1O15162 318 aa20.94■□□□□ 0.94
PKNOX1-204ENST00000456957 GIGYF1O75420 1035 aaPredicted RBP20.94■□□□□ 0.94
PKNOX1-204ENST00000456957 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
PKNOX1-204ENST00000456957 NUP188Q5SRE5 1749 aa20.94■□□□□ 0.94
PKNOX1-204ENST00000456957 ELL2O00472 640 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-204ENST00000456957 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
PKNOX1-204ENST00000456957 SF3B2Q13435 895 aaKnown RBP20.93■□□□□ 0.94
PKNOX1-204ENST00000456957 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 ITPK1Q13572 414 aa20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 TWISTNBQ3B726 338 aaPredicted RBP20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 DNAJC10Q8IXB1 793 aa20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 MYH14Q7Z406 1995 aaKnown RBP20.92■□□□□ 0.94
PKNOX1-204ENST00000456957 HOXB7P09629 217 aa20.91■□□□□ 0.94
PKNOX1-204ENST00000456957 KCNQ4P56696 695 aa20.91■□□□□ 0.94
PKNOX1-204ENST00000456957 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
PKNOX1-204ENST00000456957 TXNRD1Q16881 649 aa20.9■□□□□ 0.94
PKNOX1-204ENST00000456957 PROM2Q8N271 834 aa20.9■□□□□ 0.94
PKNOX1-204ENST00000456957 CACNA1FO60840 1977 aa20.9■□□□□ 0.94
PKNOX1-204ENST00000456957 VAMP4O75379 141 aa20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 BAG6P46379 1132 aa20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 DEFB132Q7Z7B7 95 aa20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms