RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
PMPCB-206ENST00000456433 FAM9BQ8IZU0 186 aa22.52■■□□□ 1.2
PMPCB-206ENST00000456433 CAMKK2Q96RR4 588 aa22.52■■□□□ 1.2
PMPCB-206ENST00000456433 APAF1O14727 1248 aa22.51■■□□□ 1.19
PMPCB-206ENST00000456433 DEFB132Q7Z7B7 95 aa22.51■■□□□ 1.19
PMPCB-206ENST00000456433 NFATC2IPQ8NCF5 419 aa22.51■■□□□ 1.19
PMPCB-206ENST00000456433 EN1Q05925 392 aaPredicted RBP22.5■■□□□ 1.19
PMPCB-206ENST00000456433 MCM10Q7L590 875 aa22.5■■□□□ 1.19
PMPCB-206ENST00000456433 SMARCC1Q92922 1105 aaPredicted RBP22.5■■□□□ 1.19
PMPCB-206ENST00000456433 TEFQ10587 303 aa22.49■■□□□ 1.19
PMPCB-206ENST00000456433 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
PMPCB-206ENST00000456433 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
PMPCB-206ENST00000456433 TRIM35Q9UPQ4 493 aa22.48■■□□□ 1.19
PMPCB-206ENST00000456433 ZNF831Q5JPB2 1677 aa22.48■■□□□ 1.19
PMPCB-206ENST00000456433 PALLDQ8WX93 1383 aa22.48■■□□□ 1.19
PMPCB-206ENST00000456433 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
PMPCB-206ENST00000456433 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
PMPCB-206ENST00000456433 EZH2Q15910 746 aaKnown RBP22.46■■□□□ 1.19
PMPCB-206ENST00000456433 CCDC27Q2M243 656 aa22.46■■□□□ 1.19
PMPCB-206ENST00000456433 ASAP1Q9ULH1 1129 aa22.46■■□□□ 1.19
PMPCB-206ENST00000456433 NUP188Q5SRE5 1749 aa22.45■■□□□ 1.19
PMPCB-206ENST00000456433 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
PMPCB-206ENST00000456433 TXNRD1Q16881 649 aa22.45■■□□□ 1.18
PMPCB-206ENST00000456433 SLC27A3Q5K4L6 730 aa22.45■■□□□ 1.18
PMPCB-206ENST00000456433 PROM2Q8N271 834 aa22.45■■□□□ 1.18
PMPCB-206ENST00000456433 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
PMPCB-206ENST00000456433 CICQ96RK0 1608 aaPredicted RBP22.45■■□□□ 1.18
PMPCB-206ENST00000456433 TAF7Q15545 349 aaPredicted RBP22.43■■□□□ 1.18
PMPCB-206ENST00000456433 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
PMPCB-206ENST00000456433 KCPQ6ZWJ8 1503 aa22.42■■□□□ 1.18
PMPCB-206ENST00000456433 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
PMPCB-206ENST00000456433 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
PMPCB-206ENST00000456433 BABAM1Q9NWV8 329 aa22.41■■□□□ 1.18
PMPCB-206ENST00000456433 LOC102724428A0A0B4J2F2 783 aa22.4■■□□□ 1.18
PMPCB-206ENST00000456433 BTBD11A6QL63 1104 aa22.4■■□□□ 1.18
PMPCB-206ENST00000456433 HMGB2P26583 209 aaKnown RBP22.4■■□□□ 1.18
PMPCB-206ENST00000456433 SIK1P57059 783 aa22.4■■□□□ 1.18
PMPCB-206ENST00000456433 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
PMPCB-206ENST00000456433 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
PMPCB-206ENST00000456433 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
PMPCB-206ENST00000456433 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.17
PMPCB-206ENST00000456433 C5P01031 1676 aa22.39■■□□□ 1.17
PMPCB-206ENST00000456433 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
PMPCB-206ENST00000456433 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
PMPCB-206ENST00000456433 TTC5Q8N0Z6 440 aa22.37■■□□□ 1.17
PMPCB-206ENST00000456433 SLC4A9Q96Q91 983 aa22.37■■□□□ 1.17
PMPCB-206ENST00000456433 COL5A3P25940 1745 aaPredicted RBP22.37■■□□□ 1.17
PMPCB-206ENST00000456433 VSIG10Q8N0Z9 540 aa22.36■■□□□ 1.17
PMPCB-206ENST00000456433 TJP1Q07157 1748 aa22.36■■□□□ 1.17
PMPCB-206ENST00000456433 CHL1O00533 1208 aa22.34■■□□□ 1.17
PMPCB-206ENST00000456433 ZNF853P0CG23 659 aa22.34■■□□□ 1.17
PMPCB-206ENST00000456433 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
PMPCB-206ENST00000456433 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
PMPCB-206ENST00000456433 IL16Q14005 1332 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 KCNQ3O43525 872 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 PTCD1O75127 700 aaKnown RBP22.33■■□□□ 1.17
PMPCB-206ENST00000456433 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 ZNF496Q96IT1 587 aaPredicted RBP22.33■■□□□ 1.17
PMPCB-206ENST00000456433 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 IFT57Q9NWB7 429 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.17
PMPCB-206ENST00000456433 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
PMPCB-206ENST00000456433 C4BP0C0L5 1744 aa22.32■■□□□ 1.16
PMPCB-206ENST00000456433 ITPK1Q13572 414 aa22.32■■□□□ 1.16
PMPCB-206ENST00000456433 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
PMPCB-206ENST00000456433 TSPYL4Q9UJ04 414 aa22.32■■□□□ 1.16
PMPCB-206ENST00000456433 KCNQ4P56696 695 aa22.31■■□□□ 1.16
PMPCB-206ENST00000456433 GNAI1P63096 354 aa22.31■■□□□ 1.16
PMPCB-206ENST00000456433 MIS18AQ9NYP9 233 aa22.31■■□□□ 1.16
PMPCB-206ENST00000456433 QSER1Q2KHR3 1735 aa22.31■■□□□ 1.16
PMPCB-206ENST00000456433 NBPF14Q5TI25 921 aa22.3■■□□□ 1.16
PMPCB-206ENST00000456433 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
PMPCB-206ENST00000456433 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
PMPCB-206ENST00000456433 EIF4A1P60842 406 aaKnown RBP22.29■■□□□ 1.16
PMPCB-206ENST00000456433 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
PMPCB-206ENST00000456433 AKT1S1Q96B36 256 aa22.29■■□□□ 1.16
PMPCB-206ENST00000456433 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
PMPCB-206ENST00000456433 TEX13AQ9BXU3 409 aaPredicted RBP22.28■■□□□ 1.16
PMPCB-206ENST00000456433 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
PMPCB-206ENST00000456433 LAMB4A4D0S4 1761 aa22.27■■□□□ 1.16
PMPCB-206ENST00000456433 SLC15A2Q16348 729 aa22.27■■□□□ 1.16
PMPCB-206ENST00000456433 RC3H1Q5TC82 1133 aaKnown RBP22.27■■□□□ 1.16
PMPCB-206ENST00000456433 SALL2Q9Y467 1007 aaPredicted RBP22.27■■□□□ 1.16
PMPCB-206ENST00000456433 TUBGCP6Q96RT7 1819 aa22.27■■□□□ 1.15
PMPCB-206ENST00000456433 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
PMPCB-206ENST00000456433 SNRPA1P09661 255 aaKnown RBP22.26■■□□□ 1.15
PMPCB-206ENST00000456433 ZNF827Q17R98 1081 aa22.26■■□□□ 1.15
PMPCB-206ENST00000456433 DNAJC10Q8IXB1 793 aa22.26■■□□□ 1.15
PMPCB-206ENST00000456433 MBIPQ9NS73 344 aa22.26■■□□□ 1.15
PMPCB-206ENST00000456433 STK32BQ9NY57 414 aa22.26■■□□□ 1.15
PMPCB-206ENST00000456433 GIGYF1O75420 1035 aaPredicted RBP22.24■■□□□ 1.15
PMPCB-206ENST00000456433 CYP19A1P11511 503 aaPredicted RBP22.24■■□□□ 1.15
PMPCB-206ENST00000456433 LAS1LQ9Y4W2 734 aaKnown RBP22.24■■□□□ 1.15
PMPCB-206ENST00000456433 STARD3NLO95772 234 aa22.23■■□□□ 1.15
PMPCB-206ENST00000456433 CRKLP46109 303 aaKnown RBP22.22■■□□□ 1.15
PMPCB-206ENST00000456433 AK7Q96M32 723 aa22.22■■□□□ 1.15
PMPCB-206ENST00000456433 HOXB7P09629 217 aa22.21■■□□□ 1.15
PMPCB-206ENST00000456433 INTS5Q6P9B9 1019 aaKnown RBP22.2■■□□□ 1.14
PMPCB-206ENST00000456433 CCDC87Q9NVE4 849 aa22.2■■□□□ 1.14
PMPCB-206ENST00000456433 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms