RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	ACSBG1	Q96GR2	724 aa		13.36	□□□□□ -0.27
CHEK2-221	ENST00000456369	PKD1L3	Q7Z443	1732 aa		13.36	□□□□□ -0.27
CHEK2-221	ENST00000456369	EZH2	Q15910	746 aa	Known RBP	13.35	□□□□□ -0.27
CHEK2-221	ENST00000456369	CFAP53	Q96M91	514 aa		13.35	□□□□□ -0.27
CHEK2-221	ENST00000456369	HMOX1	P09601	288 aa		13.34	□□□□□ -0.27
CHEK2-221	ENST00000456369	PHKG2	P15735	406 aa		13.34	□□□□□ -0.27
CHEK2-221	ENST00000456369	PRIM1	P49642	420 aa	Known RBP	13.34	□□□□□ -0.27
CHEK2-221	ENST00000456369	AMOT	Q4VCS5	1084 aa		13.33	□□□□□ -0.28
CHEK2-221	ENST00000456369	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.33	□□□□□ -0.28
CHEK2-221	ENST00000456369	NHS	Q6T4R5	1651 aa		13.33	□□□□□ -0.28
CHEK2-221	ENST00000456369	SRCAP	Q6ZRS2	3230 aa		13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	SBF2	Q86WG5	1849 aa		13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	CCER2	I3L3R5	266 aa		13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	ANP32C	O43423	234 aa		13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	IFNL2	Q8IZJ0	200 aa		13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.32	□□□□□ -0.28
CHEK2-221	ENST00000456369	U2SURP	O15042	1029 aa	Known RBP	13.31	□□□□□ -0.28
CHEK2-221	ENST00000456369	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.31	□□□□□ -0.28
CHEK2-221	ENST00000456369	RSPH6A	Q9H0K4	717 aa		13.3	□□□□□ -0.28
CHEK2-221	ENST00000456369	NUDC	Q9Y266	331 aa		13.3	□□□□□ -0.28
CHEK2-221	ENST00000456369	MTHFSD	Q2M296	383 aa	Known RBP	13.29	□□□□□ -0.28
CHEK2-221	ENST00000456369	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.29	□□□□□ -0.28
CHEK2-221	ENST00000456369	SYTL4	Q96C24	671 aa	Predicted RBP	13.29	□□□□□ -0.28
CHEK2-221	ENST00000456369	DCAF5	Q96JK2	942 aa		13.29	□□□□□ -0.28
CHEK2-221	ENST00000456369	KDM6A	O15550	1401 aa	Predicted RBP	13.29	□□□□□ -0.28
CHEK2-221	ENST00000456369	FCHSD2	O94868	740 aa		13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	HSP90AB1	P08238	724 aa	Known RBP	13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	TXNRD1	Q16881	649 aa		13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	ZNF579	Q8NAF0	562 aa	Known RBP	13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	PIGB	Q92521	554 aa		13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	PHF12	Q96QT6	1004 aa		13.28	□□□□□ -0.28
CHEK2-221	ENST00000456369	DOT1L	Q8TEK3	1739 aa		13.27	□□□□□ -0.28
CHEK2-221	ENST00000456369	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.27	□□□□□ -0.28
CHEK2-221	ENST00000456369	RGPD4	Q7Z3J3	1758 aa		13.27	□□□□□ -0.28
CHEK2-221	ENST00000456369	PRKAR2B	P31323	418 aa		13.27	□□□□□ -0.29
CHEK2-221	ENST00000456369	AKAP4	Q5JQC9	854 aa		13.27	□□□□□ -0.29
CHEK2-221	ENST00000456369	MPRIP	Q6WCQ1	1025 aa		13.27	□□□□□ -0.29
CHEK2-221	ENST00000456369	PHACTR3	Q96KR7	559 aa		13.27	□□□□□ -0.29
CHEK2-221	ENST00000456369	TOGARAM1	Q9Y4F4	1720 aa		13.27	□□□□□ -0.29
CHEK2-221	ENST00000456369	ERVV-2	B6SEH9	535 aa		13.26	□□□□□ -0.29
CHEK2-221	ENST00000456369	PYGB	P11216	843 aa		13.26	□□□□□ -0.29
CHEK2-221	ENST00000456369	C1orf141	Q5JVX7	400 aa		13.26	□□□□□ -0.29
CHEK2-221	ENST00000456369	RREB1	Q92766	1687 aa		13.26	□□□□□ -0.29
CHEK2-221	ENST00000456369	LRRC4B	Q9NT99	713 aa		13.26	□□□□□ -0.29
CHEK2-221	ENST00000456369	BTAF1	O14981	1849 aa		13.25	□□□□□ -0.29
CHEK2-221	ENST00000456369	PLEKHF1	Q96S99	279 aa		13.25	□□□□□ -0.29
CHEK2-221	ENST00000456369	SLC27A3	Q5K4L6	730 aa		13.24	□□□□□ -0.29
CHEK2-221	ENST00000456369	LGR6	Q9HBX8	967 aa		13.24	□□□□□ -0.29
CHEK2-221	ENST00000456369	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.24	□□□□□ -0.29
CHEK2-221	ENST00000456369	TMOD3	Q9NYL9	352 aa		13.24	□□□□□ -0.29
CHEK2-221	ENST00000456369	NUP188	Q5SRE5	1749 aa		13.23	□□□□□ -0.29
CHEK2-221	ENST00000456369	GAS2L2	Q8NHY3	880 aa		13.23	□□□□□ -0.29
CHEK2-221	ENST00000456369	ATG3	Q9NT62	314 aa		13.23	□□□□□ -0.29
CHEK2-221	ENST00000456369	PALLD	Q8WX93	1383 aa		13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	RNMT	O43148	476 aa	Known RBP	13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	KCNQ4	P56696	695 aa		13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	R3HDM1	Q15032	1099 aa	Known RBP	13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	IL17RE	Q8NFR9	667 aa		13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	SP7	Q8TDD2	431 aa	Predicted RBP	13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	ASAP1	Q9ULH1	1129 aa		13.22	□□□□□ -0.29
CHEK2-221	ENST00000456369	MAP3K5	Q99683	1374 aa		13.21	□□□□□ -0.29
CHEK2-221	ENST00000456369	CABP4	P57796	275 aa		13.21	□□□□□ -0.29
CHEK2-221	ENST00000456369	NBPF14	Q5TI25	921 aa		13.21	□□□□□ -0.29
CHEK2-221	ENST00000456369	NFATC2IP	Q8NCF5	419 aa		13.21	□□□□□ -0.29
CHEK2-221	ENST00000456369	SMARCC1	Q92922	1105 aa	Predicted RBP	13.21	□□□□□ -0.29
CHEK2-221	ENST00000456369	MRC1	P22897	1456 aa		13.21	□□□□□ -0.3
CHEK2-221	ENST00000456369	ADAMTS7	Q9UKP4	1686 aa		13.21	□□□□□ -0.3
CHEK2-221	ENST00000456369	PAPPA	Q13219	1627 aa		13.21	□□□□□ -0.3
CHEK2-221	ENST00000456369	PSD	A5PKW4	1024 aa	Predicted RBP	13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	GNAT3	A8MTJ3	354 aa		13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	CCDC184	Q52MB2	194 aa		13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	KIF12	Q96FN5	646 aa		13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	SLC52A2	Q9HAB3	445 aa		13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	CCNL1	Q9UK58	526 aa	Predicted RBP	13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	CEMIP	Q8WUJ3	1361 aa		13.2	□□□□□ -0.3
CHEK2-221	ENST00000456369	SLC15A2	Q16348	729 aa		13.19	□□□□□ -0.3
CHEK2-221	ENST00000456369	LOC102724428	A0A0B4J2F2	783 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	MAP3K13	O43283	966 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	ECM2	O94769	699 aa	Predicted RBP	13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	SIK1	P57059	783 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	ZNF827	Q17R98	1081 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	YTHDC1	Q96MU7	727 aa	Known RBP	13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	SLC4A9	Q96Q91	983 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	ADAMTS8	Q9UP79	889 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	LY75	O60449	1722 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	ITGB4	P16144	1822 aa		13.18	□□□□□ -0.3
CHEK2-221	ENST00000456369	HTATSF1	O43719	755 aa	Known RBP	13.17	□□□□□ -0.3
CHEK2-221	ENST00000456369	CHRM1	P11229	460 aa	Predicted RBP	13.17	□□□□□ -0.3
CHEK2-221	ENST00000456369	PNN	Q9H307	717 aa	Known RBP	13.17	□□□□□ -0.3
CHEK2-221	ENST00000456369	GABBR2	O75899	941 aa		13.16	□□□□□ -0.3
CHEK2-221	ENST00000456369	CLCN6	P51797	869 aa		13.16	□□□□□ -0.3
CHEK2-221	ENST00000456369	ITPK1	Q13572	414 aa		13.16	□□□□□ -0.3
CHEK2-221	ENST00000456369	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.16	□□□□□ -0.3
CHEK2-221	ENST00000456369	STK32B	Q9NY57	414 aa		13.16	□□□□□ -0.3
CHEK2-221	ENST00000456369	WDR43	Q15061	677 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
CHEK2-221	ENST00000456369	NFE2L2	Q16236	605 aa		13.15	□□□□□ -0.3
CHEK2-221	ENST00000456369	MCM10	Q7L590	875 aa		13.15	□□□□□ -0.3
CHEK2-221	ENST00000456369	RTN4	Q9NQC3	1192 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms