RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 TECPR2O15040 1411 aa15.73■□□□□ 0.11
LINC00473-202ENST00000455853 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
LINC00473-202ENST00000455853 CHL1O00533 1208 aa15.73■□□□□ 0.11
LINC00473-202ENST00000455853 PDLIM2Q96JY6 352 aa15.73■□□□□ 0.11
LINC00473-202ENST00000455853 CACNA1FO60840 1977 aa15.72■□□□□ 0.11
LINC00473-202ENST00000455853 TUBGCP6Q96RT7 1819 aa15.72■□□□□ 0.11
LINC00473-202ENST00000455853 SDSP20132 328 aa15.72■□□□□ 0.11
LINC00473-202ENST00000455853 MED1Q15648 1581 aaPredicted RBP15.72■□□□□ 0.11
LINC00473-202ENST00000455853 EPB41L2O43491 1005 aaKnown RBP15.71■□□□□ 0.11
LINC00473-202ENST00000455853 SSH2Q76I76 1423 aa15.71■□□□□ 0.11
LINC00473-202ENST00000455853 RGPD1P0DJD0 1748 aa15.71■□□□□ 0.11
LINC00473-202ENST00000455853 ZNF500O60304 480 aaPredicted RBP15.71■□□□□ 0.1
LINC00473-202ENST00000455853 MCCP23508 829 aa15.71■□□□□ 0.1
LINC00473-202ENST00000455853 CSPP1Q1MSJ5 1256 aa15.71■□□□□ 0.1
LINC00473-202ENST00000455853 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.1
LINC00473-202ENST00000455853 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 NALCNQ8IZF0 1738 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
LINC00473-202ENST00000455853 ANAPC15P60006 121 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 NME9Q86XW9 330 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
LINC00473-202ENST00000455853 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
LINC00473-202ENST00000455853 DCCP43146 1447 aa15.7■□□□□ 0.1
LINC00473-202ENST00000455853 LRSAM1Q6UWE0 723 aa15.69■□□□□ 0.1
LINC00473-202ENST00000455853 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
LINC00473-202ENST00000455853 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
LINC00473-202ENST00000455853 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
LINC00473-202ENST00000455853 PDCL3Q9H2J4 239 aa15.69■□□□□ 0.1
LINC00473-202ENST00000455853 NCLP19338 710 aaKnown RBP15.68■□□□□ 0.1
LINC00473-202ENST00000455853 SYAP1Q96A49 352 aaPredicted RBP15.68■□□□□ 0.1
LINC00473-202ENST00000455853 NUDT16Q96DE0 195 aaKnown RBP15.68■□□□□ 0.1
LINC00473-202ENST00000455853 MST1RQ04912 1400 aa15.68■□□□□ 0.1
LINC00473-202ENST00000455853 KIAA1211Q6ZU35 1233 aa15.68■□□□□ 0.1
LINC00473-202ENST00000455853 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
LINC00473-202ENST00000455853 WAPLQ7Z5K2 1190 aa15.68■□□□□ 0.1
LINC00473-202ENST00000455853 IL17RAQ96F46 866 aa15.68■□□□□ 0.1
LINC00473-202ENST00000455853 INTS4Q96HW7 963 aaKnown RBP15.68■□□□□ 0.1
LINC00473-202ENST00000455853 CCDC39Q9UFE4 941 aa15.67■□□□□ 0.1
LINC00473-202ENST00000455853 TOPAZ1Q8N9V7 1692 aa15.67■□□□□ 0.1
LINC00473-202ENST00000455853 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
LINC00473-202ENST00000455853 C16orf71Q8IYS4 520 aaPredicted RBP15.66■□□□□ 0.1
LINC00473-202ENST00000455853 FMN2Q9NZ56 1722 aa15.66■□□□□ 0.1
LINC00473-202ENST00000455853 CUL4AQ13619 759 aa15.66■□□□□ 0.1
LINC00473-202ENST00000455853 AOX1Q06278 1338 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
LINC00473-202ENST00000455853 FBLN1P23142 703 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 SRCIN1Q9C0H9 1055 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 CRB1P82279 1406 aa15.65■□□□□ 0.1
LINC00473-202ENST00000455853 PHF14O94880 888 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 PDE1AP54750 535 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 OVOS2A0A0J9YW53 1432 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 OVOS2Q6IE36 1432 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
LINC00473-202ENST00000455853 MTERF4Q7Z6M4 381 aaKnown RBP15.64■□□□□ 0.09
LINC00473-202ENST00000455853 GPT2Q8TD30 523 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 DDX17Q92841 729 aaKnown RBP15.64■□□□□ 0.09
LINC00473-202ENST00000455853 ZKSCAN5Q9Y2L8 839 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 ZDHHC9Q9Y397 364 aa15.64■□□□□ 0.09
LINC00473-202ENST00000455853 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
LINC00473-202ENST00000455853 BRD1O95696 1058 aa15.63■□□□□ 0.09
LINC00473-202ENST00000455853 GNAI2P04899 355 aa15.63■□□□□ 0.09
LINC00473-202ENST00000455853 RRS1Q15050 365 aaKnown RBP15.63■□□□□ 0.09
LINC00473-202ENST00000455853 MEIS3Q99687 375 aa15.63■□□□□ 0.09
LINC00473-202ENST00000455853 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
LINC00473-202ENST00000455853 GNAI3P08754 354 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 PRIM1P49642 420 aaKnown RBP15.62■□□□□ 0.09
LINC00473-202ENST00000455853 SULT6B1Q6IMI4 303 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 ZGPATQ8N5A5 531 aaKnown RBP15.62■□□□□ 0.09
LINC00473-202ENST00000455853 OTUD7AQ8TE49 926 aaPredicted RBP15.62■□□□□ 0.09
LINC00473-202ENST00000455853 ORAI2Q96SN7 254 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 ESYT1Q9BSJ8 1104 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 JCADQ9P266 1359 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 PXDNLA1KZ92 1463 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 C1orf167Q5SNV9 1468 aa15.62■□□□□ 0.09
LINC00473-202ENST00000455853 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 TMX3Q96JJ7 454 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 FAM208AQ9UK61 1670 aaKnown RBP15.61■□□□□ 0.09
LINC00473-202ENST00000455853 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 AHDC1Q5TGY3 1603 aaPredicted RBP15.61■□□□□ 0.09
LINC00473-202ENST00000455853 SALL3Q9BXA9 1300 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
LINC00473-202ENST00000455853 NEK4P51957 841 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 STAP2Q9UGK3 403 aa15.61■□□□□ 0.09
LINC00473-202ENST00000455853 LRRC37A3O60309 1634 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
LINC00473-202ENST00000455853 SLC4A2P04920 1241 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 PKP1Q13835 747 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 UVSSAQ2YD98 709 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 FAM184AQ8NB25 1140 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 LRRCC1Q9C099 1032 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 RGS17Q9UGC6 210 aaPredicted RBP15.6■□□□□ 0.09
LINC00473-202ENST00000455853 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 PEAK1Q9H792 1746 aa15.6■□□□□ 0.09
LINC00473-202ENST00000455853 TSPY26PQ9H489 355 aa15.59■□□□□ 0.09
LINC00473-202ENST00000455853 TMEM63CQ9P1W3 806 aa15.59■□□□□ 0.09
LINC00473-202ENST00000455853 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms