RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 SLC27A3Q5K4L6 730 aa19.47■□□□□ 0.71
CLCN1-203ENST00000455478 MRC1P22897 1456 aa19.47■□□□□ 0.71
CLCN1-203ENST00000455478 DLG5Q8TDM6 1919 aa19.47■□□□□ 0.71
CLCN1-203ENST00000455478 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
CLCN1-203ENST00000455478 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
CLCN1-203ENST00000455478 RUNDC1Q96C34 613 aa19.46■□□□□ 0.71
CLCN1-203ENST00000455478 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
CLCN1-203ENST00000455478 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
CLCN1-203ENST00000455478 MCM10Q7L590 875 aa19.44■□□□□ 0.7
CLCN1-203ENST00000455478 RTF1Q92541 710 aaKnown RBP19.44■□□□□ 0.7
CLCN1-203ENST00000455478 ANO8Q9HCE9 1232 aaPredicted RBP19.44■□□□□ 0.7
CLCN1-203ENST00000455478 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
CLCN1-203ENST00000455478 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
CLCN1-203ENST00000455478 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
CLCN1-203ENST00000455478 SIPA1L3O60292 1781 aaPredicted RBP19.42■□□□□ 0.7
CLCN1-203ENST00000455478 LOC102724428A0A0B4J2F2 783 aa19.42■□□□□ 0.7
CLCN1-203ENST00000455478 SIK1P57059 783 aa19.42■□□□□ 0.7
CLCN1-203ENST00000455478 TEFQ10587 303 aa19.42■□□□□ 0.7
CLCN1-203ENST00000455478 PAPPAQ13219 1627 aa19.41■□□□□ 0.7
CLCN1-203ENST00000455478 RIPK4P57078 832 aa19.41■□□□□ 0.7
CLCN1-203ENST00000455478 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
CLCN1-203ENST00000455478 R3HDM1Q15032 1099 aaKnown RBP19.41■□□□□ 0.7
CLCN1-203ENST00000455478 SLC4A9Q96Q91 983 aa19.41■□□□□ 0.7
CLCN1-203ENST00000455478 PSDA5PKW4 1024 aaPredicted RBP19.4■□□□□ 0.7
CLCN1-203ENST00000455478 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
CLCN1-203ENST00000455478 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
CLCN1-203ENST00000455478 SLC15A2Q16348 729 aa19.39■□□□□ 0.69
CLCN1-203ENST00000455478 AKT1S1Q96B36 256 aa19.39■□□□□ 0.69
CLCN1-203ENST00000455478 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
CLCN1-203ENST00000455478 TAF1LQ8IZX4 1826 aa19.39■□□□□ 0.69
CLCN1-203ENST00000455478 APAF1O14727 1248 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 ATP6V1AP38606 617 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 ITPK1Q13572 414 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 ZNF827Q17R98 1081 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
CLCN1-203ENST00000455478 STK32BQ9NY57 414 aa19.38■□□□□ 0.69
CLCN1-203ENST00000455478 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
CLCN1-203ENST00000455478 C5P01031 1676 aa19.36■□□□□ 0.69
CLCN1-203ENST00000455478 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
CLCN1-203ENST00000455478 BTBD11A6QL63 1104 aa19.36■□□□□ 0.69
CLCN1-203ENST00000455478 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
CLCN1-203ENST00000455478 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
CLCN1-203ENST00000455478 KCNQ3O43525 872 aa19.35■□□□□ 0.69
CLCN1-203ENST00000455478 TAF7Q15545 349 aaPredicted RBP19.35■□□□□ 0.69
CLCN1-203ENST00000455478 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
CLCN1-203ENST00000455478 KCPQ6ZWJ8 1503 aa19.35■□□□□ 0.69
CLCN1-203ENST00000455478 HMGB2P26583 209 aaKnown RBP19.34■□□□□ 0.69
CLCN1-203ENST00000455478 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
CLCN1-203ENST00000455478 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
CLCN1-203ENST00000455478 MIER1Q8N108 512 aa19.34■□□□□ 0.69
CLCN1-203ENST00000455478 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
CLCN1-203ENST00000455478 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.68
CLCN1-203ENST00000455478 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
CLCN1-203ENST00000455478 C4BP0C0L5 1744 aa19.32■□□□□ 0.68
CLCN1-203ENST00000455478 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
CLCN1-203ENST00000455478 PDGFDQ9GZP0 370 aaPredicted RBP19.32■□□□□ 0.68
CLCN1-203ENST00000455478 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
CLCN1-203ENST00000455478 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
CLCN1-203ENST00000455478 TJP1Q07157 1748 aa19.31■□□□□ 0.68
CLCN1-203ENST00000455478 TUBGCP6Q96RT7 1819 aa19.3■□□□□ 0.68
CLCN1-203ENST00000455478 CICQ96RK0 1608 aaPredicted RBP19.3■□□□□ 0.68
CLCN1-203ENST00000455478 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
CLCN1-203ENST00000455478 COL5A3P25940 1745 aaPredicted RBP19.3■□□□□ 0.68
CLCN1-203ENST00000455478 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
CLCN1-203ENST00000455478 RC3H1Q5TC82 1133 aaKnown RBP19.29■□□□□ 0.68
CLCN1-203ENST00000455478 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
CLCN1-203ENST00000455478 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
CLCN1-203ENST00000455478 MYH14Q7Z406 1995 aaKnown RBP19.29■□□□□ 0.68
CLCN1-203ENST00000455478 QSER1Q2KHR3 1735 aa19.28■□□□□ 0.68
CLCN1-203ENST00000455478 PNPLA7Q6ZV29 1317 aa19.28■□□□□ 0.68
CLCN1-203ENST00000455478 AK7Q96M32 723 aa19.28■□□□□ 0.68
CLCN1-203ENST00000455478 HEG1Q9ULI3 1381 aa19.28■□□□□ 0.68
CLCN1-203ENST00000455478 KDM3BQ7LBC6 1761 aa19.27■□□□□ 0.68
CLCN1-203ENST00000455478 CASZ1Q86V15 1759 aa19.27■□□□□ 0.68
CLCN1-203ENST00000455478 CYP19A1P11511 503 aaPredicted RBP19.27■□□□□ 0.68
CLCN1-203ENST00000455478 SMIM5Q71RC9 77 aa19.27■□□□□ 0.68
CLCN1-203ENST00000455478 CNTNAP4Q9C0A0 1308 aa19.26■□□□□ 0.67
CLCN1-203ENST00000455478 UBR3Q6ZT12 1888 aa19.26■□□□□ 0.67
CLCN1-203ENST00000455478 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
CLCN1-203ENST00000455478 INTS5Q6P9B9 1019 aaKnown RBP19.26■□□□□ 0.67
CLCN1-203ENST00000455478 COL23A1Q86Y22 540 aaPredicted RBP19.26■□□□□ 0.67
CLCN1-203ENST00000455478 BABAM1Q9NWV8 329 aa19.26■□□□□ 0.67
CLCN1-203ENST00000455478 CHL1O00533 1208 aa19.25■□□□□ 0.67
CLCN1-203ENST00000455478 GNPATO15228 680 aa19.25■□□□□ 0.67
CLCN1-203ENST00000455478 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
CLCN1-203ENST00000455478 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
CLCN1-203ENST00000455478 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
CLCN1-203ENST00000455478 RPS6KA4O75676 772 aa19.24■□□□□ 0.67
CLCN1-203ENST00000455478 EIF4A1P60842 406 aaKnown RBP19.24■□□□□ 0.67
CLCN1-203ENST00000455478 TEX13AQ9BXU3 409 aaPredicted RBP19.24■□□□□ 0.67
CLCN1-203ENST00000455478 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
CLCN1-203ENST00000455478 SNRPA1P09661 255 aaKnown RBP19.23■□□□□ 0.67
CLCN1-203ENST00000455478 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
CLCN1-203ENST00000455478 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
CLCN1-203ENST00000455478 CCDC87Q9NVE4 849 aa19.23■□□□□ 0.67
CLCN1-203ENST00000455478 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
CLCN1-203ENST00000455478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.22■□□□□ 0.67
CLCN1-203ENST00000455478 ZBTB7AO95365 584 aa19.22■□□□□ 0.67
CLCN1-203ENST00000455478 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms