RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TEFQ10587 303 aa14.68□□□□□ -0.06
TRAF4-206ENST00000454852 KRT27Q7Z3Y8 459 aa14.68□□□□□ -0.06
TRAF4-206ENST00000454852 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-206ENST00000454852 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
TRAF4-206ENST00000454852 A0A0G2JS52 829 aa14.67□□□□□ -0.06
TRAF4-206ENST00000454852 MYT1Q01538 1121 aa14.67□□□□□ -0.06
TRAF4-206ENST00000454852 MYH16Q9H6N6 1097 aa14.67□□□□□ -0.06
TRAF4-206ENST00000454852 SBF2Q86WG5 1849 aa14.66□□□□□ -0.06
TRAF4-206ENST00000454852 DUSP27Q5VZP5 1158 aa14.66□□□□□ -0.06
TRAF4-206ENST00000454852 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
TRAF4-206ENST00000454852 CABP4P57796 275 aa14.65□□□□□ -0.06
TRAF4-206ENST00000454852 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
TRAF4-206ENST00000454852 NFATC2IPQ8NCF5 419 aa14.65□□□□□ -0.06
TRAF4-206ENST00000454852 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
TRAF4-206ENST00000454852 FANCIQ9NVI1 1328 aa14.65□□□□□ -0.06
TRAF4-206ENST00000454852 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
TRAF4-206ENST00000454852 HEG1Q9ULI3 1381 aa14.63□□□□□ -0.07
TRAF4-206ENST00000454852 BTBD11A6QL63 1104 aa14.63□□□□□ -0.07
TRAF4-206ENST00000454852 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
TRAF4-206ENST00000454852 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
TRAF4-206ENST00000454852 CT47B1P0C2W7 299 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-206ENST00000454852 PRIM1P49642 420 aaKnown RBP14.62□□□□□ -0.07
TRAF4-206ENST00000454852 ZNF790Q6PG37 636 aa14.62□□□□□ -0.07
TRAF4-206ENST00000454852 PIGBQ92521 554 aa14.62□□□□□ -0.07
TRAF4-206ENST00000454852 TSPYL4Q9UJ04 414 aa14.62□□□□□ -0.07
TRAF4-206ENST00000454852 CICQ96RK0 1608 aaPredicted RBP14.62□□□□□ -0.07
TRAF4-206ENST00000454852 ZNF831Q5JPB2 1677 aa14.61□□□□□ -0.07
TRAF4-206ENST00000454852 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
TRAF4-206ENST00000454852 HOXB7P09629 217 aa14.6□□□□□ -0.07
TRAF4-206ENST00000454852 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
TRAF4-206ENST00000454852 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
TRAF4-206ENST00000454852 BCL11BQ9C0K0 894 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-206ENST00000454852 ZNF428Q96B54 188 aa14.59□□□□□ -0.07
TRAF4-206ENST00000454852 ATG3Q9NT62 314 aa14.59□□□□□ -0.07
TRAF4-206ENST00000454852 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
TRAF4-206ENST00000454852 BTAF1O14981 1849 aa14.59□□□□□ -0.07
TRAF4-206ENST00000454852 KCNQ2O43526 872 aa14.58□□□□□ -0.08
TRAF4-206ENST00000454852 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
TRAF4-206ENST00000454852 SMARCC1Q92922 1105 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-206ENST00000454852 ACSBG1Q96GR2 724 aa14.58□□□□□ -0.08
TRAF4-206ENST00000454852 LAS1LQ9Y4W2 734 aaKnown RBP14.58□□□□□ -0.08
TRAF4-206ENST00000454852 KCNQ3O43525 872 aa14.57□□□□□ -0.08
TRAF4-206ENST00000454852 EXOSC9Q06265 439 aaKnown RBP14.57□□□□□ -0.08
TRAF4-206ENST00000454852 FAM182BQ5T319 152 aa14.57□□□□□ -0.08
TRAF4-206ENST00000454852 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
TRAF4-206ENST00000454852 LY75O60449 1722 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 RGPD3A6NKT7 1758 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-206ENST00000454852 RGPD4Q7Z3J3 1758 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 SLC39A6Q13433 755 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 C8orf58Q8NAV2 365 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-206ENST00000454852 ZNF496Q96IT1 587 aaPredicted RBP14.56□□□□□ -0.08
TRAF4-206ENST00000454852 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 ASAP1Q9ULH1 1129 aa14.56□□□□□ -0.08
TRAF4-206ENST00000454852 TNS1Q9HBL0 1735 aaKnown RBP14.55□□□□□ -0.08
TRAF4-206ENST00000454852 LAMB4A4D0S4 1761 aa14.55□□□□□ -0.08
TRAF4-206ENST00000454852 VAMP4O75379 141 aa14.55□□□□□ -0.08
TRAF4-206ENST00000454852 GIGYF1O75420 1035 aaPredicted RBP14.55□□□□□ -0.08
TRAF4-206ENST00000454852 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
TRAF4-206ENST00000454852 TWISTNBQ3B726 338 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-206ENST00000454852 PALLDQ8WX93 1383 aa14.54□□□□□ -0.08
TRAF4-206ENST00000454852 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
TRAF4-206ENST00000454852 C5P01031 1676 aa14.53□□□□□ -0.08
TRAF4-206ENST00000454852 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-206ENST00000454852 SNRPA1P09661 255 aaKnown RBP14.53□□□□□ -0.08
TRAF4-206ENST00000454852 PTF1AQ7RTS3 328 aa14.53□□□□□ -0.08
TRAF4-206ENST00000454852 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
TRAF4-206ENST00000454852 TJP1Q07157 1748 aa14.52□□□□□ -0.08
TRAF4-206ENST00000454852 PLSCR1O15162 318 aa14.52□□□□□ -0.09
TRAF4-206ENST00000454852 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-206ENST00000454852 KRT24Q2M2I5 525 aa14.52□□□□□ -0.09
TRAF4-206ENST00000454852 ALDH1L2Q3SY69 923 aa14.52□□□□□ -0.09
TRAF4-206ENST00000454852 TEX13AQ9BXU3 409 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-206ENST00000454852 TRIM37O94972 964 aa14.51□□□□□ -0.09
TRAF4-206ENST00000454852 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
TRAF4-206ENST00000454852 COL5A3P25940 1745 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-206ENST00000454852 ERBB4Q15303 1308 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 EP400Q96L91 3159 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 RREB1Q92766 1687 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 LOC102724428A0A0B4J2F2 783 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 HMGB2P26583 209 aaKnown RBP14.5□□□□□ -0.09
TRAF4-206ENST00000454852 SIK1P57059 783 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 CACNA1FO60840 1977 aa14.5□□□□□ -0.09
TRAF4-206ENST00000454852 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
TRAF4-206ENST00000454852 RARSP54136 660 aaKnown RBP14.49□□□□□ -0.09
TRAF4-206ENST00000454852 CCDC125Q86Z20 511 aa14.49□□□□□ -0.09
TRAF4-206ENST00000454852 SLC27A3Q5K4L6 730 aa14.48□□□□□ -0.09
TRAF4-206ENST00000454852 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
TRAF4-206ENST00000454852 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
TRAF4-206ENST00000454852 PRAMEF22A3QJZ6 481 aa14.47□□□□□ -0.09
TRAF4-206ENST00000454852 ELL2O00472 640 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-206ENST00000454852 HDGFL1Q5TGJ6 251 aa14.47□□□□□ -0.09
TRAF4-206ENST00000454852 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
TRAF4-206ENST00000454852 USP16Q9Y5T5 823 aa14.47□□□□□ -0.09
TRAF4-206ENST00000454852 TAF1LQ8IZX4 1826 aa14.47□□□□□ -0.09
TRAF4-206ENST00000454852 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
TRAF4-206ENST00000454852 STARD3NLO95772 234 aa14.46□□□□□ -0.09
TRAF4-206ENST00000454852 CYP19A1P11511 503 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-206ENST00000454852 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
TRAF4-206ENST00000454852 DNAJC10Q8IXB1 793 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms