RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 GBP4Q96PP9 640 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
ECHDC1-209ENST00000454591 AOX1Q06278 1338 aa15.46■□□□□ 0.07
ECHDC1-209ENST00000454591 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
ECHDC1-209ENST00000454591 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 CD2BP2O95400 341 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 ATP8B2P98198 1209 aa15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 FLIIQ13045 1269 aa15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 IP6K1Q92551 441 aa15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 TNPO1Q92973 898 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 SLIT3O75094 1523 aa15.45■□□□□ 0.06
ECHDC1-209ENST00000454591 REC8O95072 547 aa15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 C16orf71Q8IYS4 520 aaPredicted RBP15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 STAP2Q9UGK3 403 aa15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 IBTKQ9P2D0 1353 aaPredicted RBP15.44■□□□□ 0.06
ECHDC1-209ENST00000454591 PDE1AP54750 535 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 GOLGA6L3A6NEY3 463 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 OTUD7AQ8TE49 926 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 SRCIN1Q9C0H9 1055 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 MST1RQ04912 1400 aa15.43■□□□□ 0.06
ECHDC1-209ENST00000454591 ABTB2Q8N961 1025 aa15.42■□□□□ 0.06
ECHDC1-209ENST00000454591 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 SETD1BQ9UPS6 1966 aaKnown RBP15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 F6X3S4 739 aa15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 ERC2O15083 957 aa15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 CYP2E1P05181 493 aaPredicted RBP15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 CRYBG1Q9Y4K1 1723 aa15.41■□□□□ 0.06
ECHDC1-209ENST00000454591 SOX12O15370 315 aa15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 SMARCA5O60264 1052 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 MRE11P49959 708 aa15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 SSH3Q8TE77 659 aa15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 SIPA1L3O60292 1781 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-209ENST00000454591 TRPM3Q9HCF6 1732 aaPredicted RBP15.39■□□□□ 0.05
ECHDC1-209ENST00000454591 NUCB2P80303 420 aa15.39■□□□□ 0.05
ECHDC1-209ENST00000454591 ANKLE2Q86XL3 938 aa15.39■□□□□ 0.05
ECHDC1-209ENST00000454591 LRRCC1Q9C099 1032 aa15.39■□□□□ 0.05
ECHDC1-209ENST00000454591 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
ECHDC1-209ENST00000454591 XRCC6P12956 609 aaKnown RBP eCLIP15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 ABCC6O95255 1503 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 ST18O60284 1047 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 ANAPC15P60006 121 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 POLA2Q14181 598 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 USP44Q9H0E7 712 aa15.38■□□□□ 0.05
ECHDC1-209ENST00000454591 HSP90AA1P07900 732 aaKnown RBP15.37■□□□□ 0.05
ECHDC1-209ENST00000454591 MCM2P49736 904 aa15.37■□□□□ 0.05
ECHDC1-209ENST00000454591 PLEKHG2Q9H7P9 1386 aa15.37■□□□□ 0.05
ECHDC1-209ENST00000454591 MX1P20591 662 aa15.36■□□□□ 0.05
ECHDC1-209ENST00000454591 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
ECHDC1-209ENST00000454591 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
ECHDC1-209ENST00000454591 PNMA6EA0A0J9YXQ4 647 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 GOLGA6L22H0YM25 854 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 ESYT1Q9BSJ8 1104 aa15.35■□□□□ 0.05
ECHDC1-209ENST00000454591 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
ECHDC1-209ENST00000454591 USP42Q9H9J4 1324 aaKnown RBP15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 SSFA2P28290 1259 aa15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 KLHL40Q2TBA0 621 aa15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 NBPF6Q5VWK0 638 aa15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 NBPF4Q96M43 638 aa15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 EXOC6BQ9Y2D4 811 aa15.33■□□□□ 0.05
ECHDC1-209ENST00000454591 CHMLP26374 656 aa15.33■□□□□ 0.04
ECHDC1-209ENST00000454591 MTX1Q13505 466 aa15.33■□□□□ 0.04
ECHDC1-209ENST00000454591 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
ECHDC1-209ENST00000454591 GRPEL1Q9HAV7 217 aa15.33■□□□□ 0.04
ECHDC1-209ENST00000454591 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
ECHDC1-209ENST00000454591 NPHP4O75161 1426 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-209ENST00000454591 CUL4AQ13619 759 aa15.32■□□□□ 0.04
ECHDC1-209ENST00000454591 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
ECHDC1-209ENST00000454591 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
ECHDC1-209ENST00000454591 MCCP23508 829 aa15.31■□□□□ 0.04
ECHDC1-209ENST00000454591 HSP90AB4PQ58FF6 505 aa15.31■□□□□ 0.04
ECHDC1-209ENST00000454591 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
ECHDC1-209ENST00000454591 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
ECHDC1-209ENST00000454591 INTS4Q96HW7 963 aaKnown RBP15.3■□□□□ 0.04
ECHDC1-209ENST00000454591 APBB1O00213 710 aa15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 ADCY9O60503 1353 aa15.29■□□□□ 0.04
ECHDC1-209ENST00000454591 PSME1Q06323 249 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms