RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
HDAC4-205ENST00000454542 KCPQ6ZWJ8 1503 aa18.91■□□□□ 0.62
HDAC4-205ENST00000454542 ZNF827Q17R98 1081 aa18.91■□□□□ 0.62
HDAC4-205ENST00000454542 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
HDAC4-205ENST00000454542 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
HDAC4-205ENST00000454542 ATG3Q9NT62 314 aa18.91■□□□□ 0.62
HDAC4-205ENST00000454542 CCNL1Q9UK58 526 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-205ENST00000454542 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
HDAC4-205ENST00000454542 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
HDAC4-205ENST00000454542 ASAP1Q9ULH1 1129 aa18.9■□□□□ 0.62
HDAC4-205ENST00000454542 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
HDAC4-205ENST00000454542 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
HDAC4-205ENST00000454542 CABP4P57796 275 aa18.89■□□□□ 0.61
HDAC4-205ENST00000454542 LGR6Q9HBX8 967 aa18.89■□□□□ 0.61
HDAC4-205ENST00000454542 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
HDAC4-205ENST00000454542 GNAT3A8MTJ3 354 aa18.88■□□□□ 0.61
HDAC4-205ENST00000454542 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
HDAC4-205ENST00000454542 SIK1P57059 783 aa18.87■□□□□ 0.61
HDAC4-205ENST00000454542 KCNQ4P56696 695 aa18.86■□□□□ 0.61
HDAC4-205ENST00000454542 NFATC2IPQ8NCF5 419 aa18.86■□□□□ 0.61
HDAC4-205ENST00000454542 IL17REQ8NFR9 667 aa18.86■□□□□ 0.61
HDAC4-205ENST00000454542 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
HDAC4-205ENST00000454542 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
HDAC4-205ENST00000454542 PNPLA7Q6ZV29 1317 aa18.83■□□□□ 0.61
HDAC4-205ENST00000454542 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
HDAC4-205ENST00000454542 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
HDAC4-205ENST00000454542 ITPK1Q13572 414 aa18.83■□□□□ 0.6
HDAC4-205ENST00000454542 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
HDAC4-205ENST00000454542 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
HDAC4-205ENST00000454542 PDGFDQ9GZP0 370 aaPredicted RBP18.82■□□□□ 0.6
HDAC4-205ENST00000454542 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
HDAC4-205ENST00000454542 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
HDAC4-205ENST00000454542 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
HDAC4-205ENST00000454542 MYH14Q7Z406 1995 aaKnown RBP18.8■□□□□ 0.6
HDAC4-205ENST00000454542 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
HDAC4-205ENST00000454542 ANP32CO43423 234 aa18.79■□□□□ 0.6
HDAC4-205ENST00000454542 NEFMP07197 916 aa18.79■□□□□ 0.6
HDAC4-205ENST00000454542 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
HDAC4-205ENST00000454542 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
HDAC4-205ENST00000454542 C4AP0C0L4 1744 aa18.79■□□□□ 0.6
HDAC4-205ENST00000454542 TEFQ10587 303 aa18.78■□□□□ 0.6
HDAC4-205ENST00000454542 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
HDAC4-205ENST00000454542 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
HDAC4-205ENST00000454542 MCM10Q7L590 875 aa18.77■□□□□ 0.6
HDAC4-205ENST00000454542 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
HDAC4-205ENST00000454542 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
HDAC4-205ENST00000454542 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
HDAC4-205ENST00000454542 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
HDAC4-205ENST00000454542 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
HDAC4-205ENST00000454542 LAMB4A4D0S4 1761 aa18.76■□□□□ 0.59
HDAC4-205ENST00000454542 PTCD1O75127 700 aaKnown RBP18.75■□□□□ 0.59
HDAC4-205ENST00000454542 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 RC3H1Q5TC82 1133 aaKnown RBP18.75■□□□□ 0.59
HDAC4-205ENST00000454542 ZNF790Q6PG37 636 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 VSIG10Q8N0Z9 540 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 SLC16A10Q8TF71 515 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 SGIP1Q9BQI5 828 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 MTFR1LQ9H019 292 aa18.75■□□□□ 0.59
HDAC4-205ENST00000454542 HEG1Q9ULI3 1381 aa18.74■□□□□ 0.59
HDAC4-205ENST00000454542 SSFA2P28290 1259 aa18.74■□□□□ 0.59
HDAC4-205ENST00000454542 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
HDAC4-205ENST00000454542 AK7Q96M32 723 aa18.74■□□□□ 0.59
HDAC4-205ENST00000454542 PTGER2P43116 358 aa18.73■□□□□ 0.59
HDAC4-205ENST00000454542 COL23A1Q86Y22 540 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-205ENST00000454542 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
HDAC4-205ENST00000454542 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
HDAC4-205ENST00000454542 SPON1Q9HCB6 807 aa18.73■□□□□ 0.59
HDAC4-205ENST00000454542 ZBTB7AO95365 584 aa18.72■□□□□ 0.59
HDAC4-205ENST00000454542 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
HDAC4-205ENST00000454542 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
HDAC4-205ENST00000454542 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
HDAC4-205ENST00000454542 PNISRQ8TF01 805 aaKnown RBP18.71■□□□□ 0.59
HDAC4-205ENST00000454542 ZNF496Q96IT1 587 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-205ENST00000454542 GNPATO15228 680 aa18.7■□□□□ 0.58
HDAC4-205ENST00000454542 LMOD3Q0VAK6 560 aa18.7■□□□□ 0.58
HDAC4-205ENST00000454542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.69■□□□□ 0.58
HDAC4-205ENST00000454542 KCNQ3O43525 872 aa18.69■□□□□ 0.58
HDAC4-205ENST00000454542 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-205ENST00000454542 ADRA2BP18089 450 aa18.69■□□□□ 0.58
HDAC4-205ENST00000454542 CRKLP46109 303 aaKnown RBP18.69■□□□□ 0.58
HDAC4-205ENST00000454542 RIPK4P57078 832 aa18.69■□□□□ 0.58
HDAC4-205ENST00000454542 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
HDAC4-205ENST00000454542 MRS2Q9HD23 443 aa18.69■□□□□ 0.58
HDAC4-205ENST00000454542 RPS6KA4O75676 772 aa18.68■□□□□ 0.58
HDAC4-205ENST00000454542 TAF7Q15545 349 aaPredicted RBP18.68■□□□□ 0.58
HDAC4-205ENST00000454542 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
HDAC4-205ENST00000454542 FMNL2Q96PY5 1086 aa18.68■□□□□ 0.58
HDAC4-205ENST00000454542 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
HDAC4-205ENST00000454542 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
HDAC4-205ENST00000454542 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
HDAC4-205ENST00000454542 SMIM5Q71RC9 77 aa18.66■□□□□ 0.58
HDAC4-205ENST00000454542 CCDC87Q9NVE4 849 aa18.66■□□□□ 0.58
HDAC4-205ENST00000454542 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
HDAC4-205ENST00000454542 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
HDAC4-205ENST00000454542 PHF14O94880 888 aa18.65■□□□□ 0.58
HDAC4-205ENST00000454542 BABAM1Q9NWV8 329 aa18.65■□□□□ 0.58
HDAC4-205ENST00000454542 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
HDAC4-205ENST00000454542 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
HDAC4-205ENST00000454542 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms