RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 EYA1Q99502 592 aa11.26□□□□□ -0.61
RPSAP54-201ENST00000454001 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
RPSAP54-201ENST00000454001 CNGB1Q14028 1251 aaPredicted RBP11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 PANK3Q9H999 370 aa11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
RPSAP54-201ENST00000454001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 C1QTNF8P60827 252 aa11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 POLKQ9UBT6 870 aa11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
RPSAP54-201ENST00000454001 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
RPSAP54-201ENST00000454001 GNPATO15228 680 aa11.23□□□□□ -0.61
RPSAP54-201ENST00000454001 SIK1P57059 783 aa11.23□□□□□ -0.61
RPSAP54-201ENST00000454001 ITPK1Q13572 414 aa11.23□□□□□ -0.61
RPSAP54-201ENST00000454001 PHKG2P15735 406 aa11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 COL5A3P25940 1745 aaPredicted RBP11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
RPSAP54-201ENST00000454001 C4AP0C0L4 1744 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 CICQ96RK0 1608 aaPredicted RBP11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
RPSAP54-201ENST00000454001 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
RPSAP54-201ENST00000454001 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
RPSAP54-201ENST00000454001 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 KDRP35968 1356 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 NEFLP07196 543 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 SSFA2P28290 1259 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 FKBP8Q14318 412 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 AEBP1Q8IUX7 1158 aa11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 VIRMAQ69YN4 1812 aaKnown RBP11.19□□□□□ -0.62
RPSAP54-201ENST00000454001 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 MMP10P09238 476 aa11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPSAP54-201ENST00000454001 MYH14Q7Z406 1995 aaKnown RBP11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 TJP1Q07157 1748 aa11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
RPSAP54-201ENST00000454001 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 ADCY9O60503 1353 aa11.16□□□□□ -0.62
RPSAP54-201ENST00000454001 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
RPSAP54-201ENST00000454001 CABP4P57796 275 aa11.15□□□□□ -0.62
RPSAP54-201ENST00000454001 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
RPSAP54-201ENST00000454001 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
RPSAP54-201ENST00000454001 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 BRCA1P38398 1863 aaKnown RBP11.14□□□□□ -0.63
RPSAP54-201ENST00000454001 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
RPSAP54-201ENST00000454001 RFC4P35249 363 aa11.13□□□□□ -0.63
RPSAP54-201ENST00000454001 MTHFSP49914 203 aa11.13□□□□□ -0.63
RPSAP54-201ENST00000454001 PPP4R3CPQ6ZMV5 832 aa11.13□□□□□ -0.63
RPSAP54-201ENST00000454001 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 BCS1LQ9Y276 419 aa11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
RPSAP54-201ENST00000454001 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
RPSAP54-201ENST00000454001 GYS1P13807 737 aa11.11□□□□□ -0.63
RPSAP54-201ENST00000454001 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
RPSAP54-201ENST00000454001 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
RPSAP54-201ENST00000454001 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
RPSAP54-201ENST00000454001 HMOX1P09601 288 aa11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 DPEP1P16444 411 aa11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 CRKLP46109 303 aaKnown RBP11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 ADAMTS7Q9UKP4 1686 aa11.1□□□□□ -0.63
RPSAP54-201ENST00000454001 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
RPSAP54-201ENST00000454001 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
RPSAP54-201ENST00000454001 IL13P35225 146 aa11.09□□□□□ -0.63
RPSAP54-201ENST00000454001 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
RPSAP54-201ENST00000454001 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
RPSAP54-201ENST00000454001 NLGN1Q8N2Q7 840 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms