RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
CDC42EP3-203ENST00000453555 AEBP1Q8IUX7 1158 aa12.83□□□□□ -0.36
CDC42EP3-203ENST00000453555 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
CDC42EP3-203ENST00000453555 IL13P35225 146 aa12.82□□□□□ -0.36
CDC42EP3-203ENST00000453555 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-203ENST00000453555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDC42EP3-203ENST00000453555 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
CDC42EP3-203ENST00000453555 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
CDC42EP3-203ENST00000453555 PHKG2P15735 406 aa12.81□□□□□ -0.36
CDC42EP3-203ENST00000453555 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
CDC42EP3-203ENST00000453555 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
CDC42EP3-203ENST00000453555 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
CDC42EP3-203ENST00000453555 C5P01031 1676 aa12.8□□□□□ -0.36
CDC42EP3-203ENST00000453555 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP3-203ENST00000453555 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
CDC42EP3-203ENST00000453555 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP3-203ENST00000453555 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
CDC42EP3-203ENST00000453555 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
CDC42EP3-203ENST00000453555 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
CDC42EP3-203ENST00000453555 MIER1Q8N108 512 aa12.79□□□□□ -0.36
CDC42EP3-203ENST00000453555 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
CDC42EP3-203ENST00000453555 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
CDC42EP3-203ENST00000453555 SRCAPQ6ZRS2 3230 aa12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 HMOX1P09601 288 aa12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 PIGBQ92521 554 aa12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
CDC42EP3-203ENST00000453555 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
CDC42EP3-203ENST00000453555 CLCN6P51797 869 aa12.77□□□□□ -0.37
CDC42EP3-203ENST00000453555 AMOTQ4VCS5 1084 aa12.77□□□□□ -0.37
CDC42EP3-203ENST00000453555 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
CDC42EP3-203ENST00000453555 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
CDC42EP3-203ENST00000453555 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
CDC42EP3-203ENST00000453555 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
CDC42EP3-203ENST00000453555 KDRP35968 1356 aa12.76□□□□□ -0.37
CDC42EP3-203ENST00000453555 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
CDC42EP3-203ENST00000453555 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
CDC42EP3-203ENST00000453555 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
CDC42EP3-203ENST00000453555 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
CDC42EP3-203ENST00000453555 SMARCC1Q92922 1105 aaPredicted RBP12.75□□□□□ -0.37
CDC42EP3-203ENST00000453555 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
CDC42EP3-203ENST00000453555 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 HSP90AB1P08238 724 aaKnown RBP12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
CDC42EP3-203ENST00000453555 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
CDC42EP3-203ENST00000453555 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
CDC42EP3-203ENST00000453555 CABP4P57796 275 aa12.73□□□□□ -0.37
CDC42EP3-203ENST00000453555 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
CDC42EP3-203ENST00000453555 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
CDC42EP3-203ENST00000453555 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
CDC42EP3-203ENST00000453555 PTGER2P43116 358 aa12.72□□□□□ -0.37
CDC42EP3-203ENST00000453555 CFAP53Q96M91 514 aa12.72□□□□□ -0.37
CDC42EP3-203ENST00000453555 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
CDC42EP3-203ENST00000453555 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
CDC42EP3-203ENST00000453555 SIK1P57059 783 aa12.71□□□□□ -0.37
CDC42EP3-203ENST00000453555 MTHFSDQ2M296 383 aaKnown RBP12.71□□□□□ -0.37
CDC42EP3-203ENST00000453555 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.37
CDC42EP3-203ENST00000453555 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
CDC42EP3-203ENST00000453555 DDX10Q13206 875 aaKnown RBP12.7□□□□□ -0.38
CDC42EP3-203ENST00000453555 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
CDC42EP3-203ENST00000453555 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
CDC42EP3-203ENST00000453555 COL24A1Q17RW2 1714 aa12.7□□□□□ -0.38
CDC42EP3-203ENST00000453555 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 ITPK1Q13572 414 aa12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 AK7Q96M32 723 aa12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 LGR6Q9HBX8 967 aa12.69□□□□□ -0.38
CDC42EP3-203ENST00000453555 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 PHF14O94880 888 aa12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
CDC42EP3-203ENST00000453555 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 SLC4A9Q96Q91 983 aa12.67□□□□□ -0.38
CDC42EP3-203ENST00000453555 TJP1Q07157 1748 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 ARXQ96QS3 562 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
CDC42EP3-203ENST00000453555 GNPATO15228 680 aa12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 POLD1P28340 1107 aa12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
CDC42EP3-203ENST00000453555 PHACTR3Q96KR7 559 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms