RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
NCKIPSD-207ENST00000453349 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
NCKIPSD-207ENST00000453349 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
NCKIPSD-207ENST00000453349 TXNRD1Q16881 649 aa19.19■□□□□ 0.66
NCKIPSD-207ENST00000453349 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
NCKIPSD-207ENST00000453349 ADAMTS7Q9UKP4 1686 aa19.18■□□□□ 0.66
NCKIPSD-207ENST00000453349 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-207ENST00000453349 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 TAF7Q15545 349 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 SLC27A3Q5K4L6 730 aa19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 EP400Q96L91 3159 aa19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
NCKIPSD-207ENST00000453349 BTBD11A6QL63 1104 aa19.16■□□□□ 0.66
NCKIPSD-207ENST00000453349 PROM2Q8N271 834 aa19.16■□□□□ 0.66
NCKIPSD-207ENST00000453349 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
NCKIPSD-207ENST00000453349 MRC1P22897 1456 aa19.16■□□□□ 0.66
NCKIPSD-207ENST00000453349 TTC5Q8N0Z6 440 aa19.15■□□□□ 0.66
NCKIPSD-207ENST00000453349 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-207ENST00000453349 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-207ENST00000453349 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-207ENST00000453349 RGPD3A6NKT7 1758 aaPredicted RBP19.14■□□□□ 0.66
NCKIPSD-207ENST00000453349 RGPD4Q7Z3J3 1758 aa19.14■□□□□ 0.66
NCKIPSD-207ENST00000453349 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
NCKIPSD-207ENST00000453349 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
NCKIPSD-207ENST00000453349 LOC102724428A0A0B4J2F2 783 aa19.13■□□□□ 0.65
NCKIPSD-207ENST00000453349 PTCD1O75127 700 aaKnown RBP19.13■□□□□ 0.65
NCKIPSD-207ENST00000453349 SIK1P57059 783 aa19.13■□□□□ 0.65
NCKIPSD-207ENST00000453349 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
NCKIPSD-207ENST00000453349 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
NCKIPSD-207ENST00000453349 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
NCKIPSD-207ENST00000453349 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-207ENST00000453349 ZNF790Q6PG37 636 aa19.12■□□□□ 0.65
NCKIPSD-207ENST00000453349 NGEFQ8N5V2 710 aa19.12■□□□□ 0.65
NCKIPSD-207ENST00000453349 CCDC27Q2M243 656 aa19.11■□□□□ 0.65
NCKIPSD-207ENST00000453349 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
NCKIPSD-207ENST00000453349 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
NCKIPSD-207ENST00000453349 LY75O60449 1722 aa19.11■□□□□ 0.65
NCKIPSD-207ENST00000453349 KCNQ4P56696 695 aa19.1■□□□□ 0.65
NCKIPSD-207ENST00000453349 BABAM1Q9NWV8 329 aa19.1■□□□□ 0.65
NCKIPSD-207ENST00000453349 MIS18AQ9NYP9 233 aa19.1■□□□□ 0.65
NCKIPSD-207ENST00000453349 LAS1LQ9Y4W2 734 aaKnown RBP19.1■□□□□ 0.65
NCKIPSD-207ENST00000453349 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
NCKIPSD-207ENST00000453349 RREB1Q92766 1687 aa19.08■□□□□ 0.65
NCKIPSD-207ENST00000453349 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
NCKIPSD-207ENST00000453349 FMNL2Q96PY5 1086 aa19.08■□□□□ 0.64
NCKIPSD-207ENST00000453349 TSPYL4Q9UJ04 414 aa19.08■□□□□ 0.64
NCKIPSD-207ENST00000453349 KCNQ3O43525 872 aa19.07■□□□□ 0.64
NCKIPSD-207ENST00000453349 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
NCKIPSD-207ENST00000453349 STK32BQ9NY57 414 aa19.07■□□□□ 0.64
NCKIPSD-207ENST00000453349 ZNF496Q96IT1 587 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-207ENST00000453349 PAPPAQ13219 1627 aa19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 GNAI1P63096 354 aa19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 CFAP44Q96MT7 982 aa19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 TEX13AQ9BXU3 409 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
NCKIPSD-207ENST00000453349 CHL1O00533 1208 aa19.04■□□□□ 0.64
NCKIPSD-207ENST00000453349 ITPK1Q13572 414 aa19.04■□□□□ 0.64
NCKIPSD-207ENST00000453349 SLC15A2Q16348 729 aa19.04■□□□□ 0.64
NCKIPSD-207ENST00000453349 WDR63Q8IWG1 891 aa19.04■□□□□ 0.64
NCKIPSD-207ENST00000453349 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
NCKIPSD-207ENST00000453349 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
NCKIPSD-207ENST00000453349 ZNF831Q5JPB2 1677 aa19.03■□□□□ 0.64
NCKIPSD-207ENST00000453349 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
NCKIPSD-207ENST00000453349 SNRPA1P09661 255 aaKnown RBP19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 EIF4A1P60842 406 aaKnown RBP19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 DNAJC10Q8IXB1 793 aa19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 LINC00116Q8NCU8 138 aa19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 AK7Q96M32 723 aa19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 TFCP2L1Q9NZI6 479 aa19.02■□□□□ 0.64
NCKIPSD-207ENST00000453349 STARD3NLO95772 234 aa19.01■□□□□ 0.63
NCKIPSD-207ENST00000453349 ZNF853P0CG23 659 aa19.01■□□□□ 0.63
NCKIPSD-207ENST00000453349 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
NCKIPSD-207ENST00000453349 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
NCKIPSD-207ENST00000453349 IL16Q14005 1332 aa19■□□□□ 0.63
NCKIPSD-207ENST00000453349 R3HDM1Q15032 1099 aaKnown RBP19■□□□□ 0.63
NCKIPSD-207ENST00000453349 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
NCKIPSD-207ENST00000453349 ANO8Q9HCE9 1232 aaPredicted RBP19■□□□□ 0.63
NCKIPSD-207ENST00000453349 C5P01031 1676 aa19■□□□□ 0.63
NCKIPSD-207ENST00000453349 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
NCKIPSD-207ENST00000453349 ZNF827Q17R98 1081 aa18.99■□□□□ 0.63
NCKIPSD-207ENST00000453349 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
NCKIPSD-207ENST00000453349 KDM3BQ7LBC6 1761 aa18.98■□□□□ 0.63
NCKIPSD-207ENST00000453349 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
NCKIPSD-207ENST00000453349 CRKLP46109 303 aaKnown RBP18.98■□□□□ 0.63
NCKIPSD-207ENST00000453349 CNTNAP4Q9C0A0 1308 aa18.98■□□□□ 0.63
NCKIPSD-207ENST00000453349 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 GIGYF1O75420 1035 aaPredicted RBP18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
NCKIPSD-207ENST00000453349 GNPATO15228 680 aa18.96■□□□□ 0.63
NCKIPSD-207ENST00000453349 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
NCKIPSD-207ENST00000453349 TJP1Q07157 1748 aa18.95■□□□□ 0.62
NCKIPSD-207ENST00000453349 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
NCKIPSD-207ENST00000453349 RPS6KA4O75676 772 aa18.95■□□□□ 0.62
NCKIPSD-207ENST00000453349 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
NCKIPSD-207ENST00000453349 GOLGA2Q08379 1002 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms