RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 HTATSF1O43719 755 aaKnown RBP25.38■■□□□ 1.65
HIGD1A-204ENST00000452906 DDX54Q8TDD1 881 aaKnown RBP25.38■■□□□ 1.65
HIGD1A-204ENST00000452906 SLC15A2Q16348 729 aa25.37■■□□□ 1.65
HIGD1A-204ENST00000452906 GNAI1P63096 354 aa25.36■■□□□ 1.65
HIGD1A-204ENST00000452906 NBPF6Q5VWK0 638 aa25.36■■□□□ 1.65
HIGD1A-204ENST00000452906 ZCRB1Q8TBF4 217 aaKnown RBP25.36■■□□□ 1.65
HIGD1A-204ENST00000452906 RAPGEF4Q8WZA2 1011 aa25.36■■□□□ 1.65
HIGD1A-204ENST00000452906 NBPF4Q96M43 638 aa25.36■■□□□ 1.65
HIGD1A-204ENST00000452906 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
HIGD1A-204ENST00000452906 SPINK5Q9NQ38 1064 aaPredicted RBP25.35■■□□□ 1.65
HIGD1A-204ENST00000452906 IFT57Q9NWB7 429 aa25.35■■□□□ 1.65
HIGD1A-204ENST00000452906 PPP1R1BQ9UD71 204 aaPredicted RBP25.35■■□□□ 1.65
HIGD1A-204ENST00000452906 FKBP8Q14318 412 aa25.34■■□□□ 1.65
HIGD1A-204ENST00000452906 AMOTQ4VCS5 1084 aa25.34■■□□□ 1.65
HIGD1A-204ENST00000452906 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.34■■□□□ 1.65
HIGD1A-204ENST00000452906 LY75O60449 1722 aa25.34■■□□□ 1.65
HIGD1A-204ENST00000452906 QSER1Q2KHR3 1735 aa25.34■■□□□ 1.65
HIGD1A-204ENST00000452906 TATP17735 454 aaPredicted RBP25.32■■□□□ 1.64
HIGD1A-204ENST00000452906 PLEKHO1Q53GL0 409 aaPredicted RBP25.32■■□□□ 1.64
HIGD1A-204ENST00000452906 FANCIQ9NVI1 1328 aa25.32■■□□□ 1.64
HIGD1A-204ENST00000452906 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
HIGD1A-204ENST00000452906 RRP1P56182 461 aaKnown RBP25.31■■□□□ 1.64
HIGD1A-204ENST00000452906 MTHFSDQ2M296 383 aaKnown RBP25.31■■□□□ 1.64
HIGD1A-204ENST00000452906 SLC27A3Q5K4L6 730 aa25.31■■□□□ 1.64
HIGD1A-204ENST00000452906 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
HIGD1A-204ENST00000452906 GNAT3A8MTJ3 354 aa25.29■■□□□ 1.64
HIGD1A-204ENST00000452906 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
HIGD1A-204ENST00000452906 CFAP44Q96MT7 982 aa25.29■■□□□ 1.64
HIGD1A-204ENST00000452906 PDGFDQ9GZP0 370 aaPredicted RBP25.29■■□□□ 1.64
HIGD1A-204ENST00000452906 PRIM1P49642 420 aaKnown RBP25.28■■□□□ 1.64
HIGD1A-204ENST00000452906 ZBTB7AO95365 584 aa25.27■■□□□ 1.64
HIGD1A-204ENST00000452906 ZNF428Q96B54 188 aa25.27■■□□□ 1.64
HIGD1A-204ENST00000452906 SYTL4Q96C24 671 aaPredicted RBP25.27■■□□□ 1.64
HIGD1A-204ENST00000452906 PCDH11XQ9BZA7 1347 aa25.27■■□□□ 1.64
HIGD1A-204ENST00000452906 PCDH11YQ9BZA8 1340 aa25.27■■□□□ 1.64
HIGD1A-204ENST00000452906 MTFR1LQ9H019 292 aa25.26■■□□□ 1.63
HIGD1A-204ENST00000452906 LRRC4BQ9NT99 713 aa25.26■■□□□ 1.63
HIGD1A-204ENST00000452906 ZNF853P0CG23 659 aa25.25■■□□□ 1.63
HIGD1A-204ENST00000452906 TUBGCP6Q96RT7 1819 aa25.24■■□□□ 1.63
HIGD1A-204ENST00000452906 PTGER2P43116 358 aa25.24■■□□□ 1.63
HIGD1A-204ENST00000452906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.24■■□□□ 1.63
HIGD1A-204ENST00000452906 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
HIGD1A-204ENST00000452906 AKAP4Q5JQC9 854 aa25.23■■□□□ 1.63
HIGD1A-204ENST00000452906 C1orf141Q5JVX7 400 aa25.23■■□□□ 1.63
HIGD1A-204ENST00000452906 BABAM1Q9NWV8 329 aa25.23■■□□□ 1.63
HIGD1A-204ENST00000452906 ITGB4P16144 1822 aa25.23■■□□□ 1.63
HIGD1A-204ENST00000452906 ZNF827Q17R98 1081 aa25.22■■□□□ 1.63
HIGD1A-204ENST00000452906 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
HIGD1A-204ENST00000452906 LAS1LQ9Y4W2 734 aaKnown RBP25.22■■□□□ 1.63
HIGD1A-204ENST00000452906 ZNF530Q6P9A1 599 aaPredicted RBP25.21■■□□□ 1.63
HIGD1A-204ENST00000452906 AKT1S1Q96B36 256 aa25.21■■□□□ 1.63
HIGD1A-204ENST00000452906 THUMPD2Q9BTF0 503 aaKnown RBP25.21■■□□□ 1.63
HIGD1A-204ENST00000452906 SPG7Q9UQ90 795 aa25.21■■□□□ 1.63
HIGD1A-204ENST00000452906 ATF5Q9Y2D1 282 aaPredicted RBP25.21■■□□□ 1.63
HIGD1A-204ENST00000452906 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.63
HIGD1A-204ENST00000452906 DCAF8L1A6NGE4 600 aa25.2■■□□□ 1.62
HIGD1A-204ENST00000452906 EXOSC9Q06265 439 aaKnown RBP25.2■■□□□ 1.62
HIGD1A-204ENST00000452906 MCM10Q7L590 875 aa25.2■■□□□ 1.62
HIGD1A-204ENST00000452906 TOGARAM1Q9Y4F4 1720 aa25.19■■□□□ 1.62
HIGD1A-204ENST00000452906 ADAMTS7Q9UKP4 1686 aa25.18■■□□□ 1.62
HIGD1A-204ENST00000452906 SGIP1Q9BQI5 828 aa25.18■■□□□ 1.62
HIGD1A-204ENST00000452906 MBIPQ9NS73 344 aa25.18■■□□□ 1.62
HIGD1A-204ENST00000452906 TAF1LQ8IZX4 1826 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 CHL1O00533 1208 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 HMGB2P26583 209 aaKnown RBP25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 RARSP54136 660 aaKnown RBP25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 DCTN1Q14203 1278 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 SLC16A10Q8TF71 515 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 C5P01031 1676 aa25.17■■□□□ 1.62
HIGD1A-204ENST00000452906 CYP27B1O15528 508 aa25.15■■□□□ 1.62
HIGD1A-204ENST00000452906 ALDH1L2Q3SY69 923 aa25.15■■□□□ 1.62
HIGD1A-204ENST00000452906 CCNL1Q9UK58 526 aaPredicted RBP25.15■■□□□ 1.62
HIGD1A-204ENST00000452906 SOS1Q07889 1333 aaPredicted RBP25.14■■□□□ 1.62
HIGD1A-204ENST00000452906 SCN11AQ9UI33 1791 aa25.14■■□□□ 1.62
HIGD1A-204ENST00000452906 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
HIGD1A-204ENST00000452906 IRX6P78412 446 aaPredicted RBP25.14■■□□□ 1.62
HIGD1A-204ENST00000452906 HSP90AB1P08238 724 aaKnown RBP25.13■■□□□ 1.61
HIGD1A-204ENST00000452906 MS4A1P11836 297 aa25.13■■□□□ 1.61
HIGD1A-204ENST00000452906 PPP4R2Q9NY27 417 aa25.13■■□□□ 1.61
HIGD1A-204ENST00000452906 TFCP2L1Q9NZI6 479 aa25.13■■□□□ 1.61
HIGD1A-204ENST00000452906 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
HIGD1A-204ENST00000452906 NKX1-1Q15270 411 aaPredicted RBP25.12■■□□□ 1.61
HIGD1A-204ENST00000452906 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
HIGD1A-204ENST00000452906 TSPYL4Q9UJ04 414 aa25.11■■□□□ 1.61
HIGD1A-204ENST00000452906 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
HIGD1A-204ENST00000452906 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 KDM3BQ7LBC6 1761 aa25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 KCNQ4P56696 695 aa25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 TEFQ10587 303 aa25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 IFNL2Q8IZJ0 200 aa25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 ARXQ96QS3 562 aa25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 FHDC1Q9C0D6 1143 aaPredicted RBP25.1■■□□□ 1.61
HIGD1A-204ENST00000452906 PALLDQ8WX93 1383 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 TWISTNBQ3B726 338 aaPredicted RBP25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 MPRIPQ6WCQ1 1025 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 IL17REQ8NFR9 667 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 SMARCC1Q92922 1105 aaPredicted RBP25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 SYT17Q9BSW7 474 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms