RNA–Protein interactions for RNA: ENST00000451586.1

TPR-202, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-202ENST00000451586 ATG3Q9NT62 314 aa32.18■■■□□ 2.74
TPR-202ENST00000451586 MIER1Q8N108 512 aa32.17■■■□□ 2.74
TPR-202ENST00000451586 SMARCC1Q92922 1105 aaPredicted RBP32.17■■■□□ 2.74
TPR-202ENST00000451586 RRP7AQ9Y3A4 280 aaKnown RBP32.17■■■□□ 2.74
TPR-202ENST00000451586 RIPK4P57078 832 aa32.16■■■□□ 2.74
TPR-202ENST00000451586 CEMIPQ8WUJ3 1361 aa32.15■■■□□ 2.74
TPR-202ENST00000451586 PALLDQ8WX93 1383 aa32.15■■■□□ 2.74
TPR-202ENST00000451586 CCER2I3L3R5 266 aa32.14■■■□□ 2.74
TPR-202ENST00000451586 NEUROD2Q15784 382 aa32.14■■■□□ 2.74
TPR-202ENST00000451586 FAM9BQ8IZU0 186 aa32.14■■■□□ 2.74
TPR-202ENST00000451586 MRC1P22897 1456 aa32.14■■■□□ 2.74
TPR-202ENST00000451586 RREB1Q92766 1687 aa32.14■■■□□ 2.74
TPR-202ENST00000451586 KCNQ4P56696 695 aa32.13■■■□□ 2.73
TPR-202ENST00000451586 TEFQ10587 303 aa32.13■■■□□ 2.73
TPR-202ENST00000451586 APAF1O14727 1248 aa32.12■■■□□ 2.73
TPR-202ENST00000451586 LRRC4BQ9NT99 713 aa32.12■■■□□ 2.73
TPR-202ENST00000451586 LY75O60449 1722 aa32.12■■■□□ 2.73
TPR-202ENST00000451586 SLC27A3Q5K4L6 730 aa32.1■■■□□ 2.73
TPR-202ENST00000451586 CCNL1Q9UK58 526 aaPredicted RBP32.1■■■□□ 2.73
TPR-202ENST00000451586 NUP188Q5SRE5 1749 aa32.09■■■□□ 2.73
TPR-202ENST00000451586 SLC39A6Q13433 755 aa32.09■■■□□ 2.73
TPR-202ENST00000451586 THUMPD2Q9BTF0 503 aaKnown RBP32.09■■■□□ 2.73
TPR-202ENST00000451586 LOC102724428A0A0B4J2F2 783 aa32.06■■■□□ 2.72
TPR-202ENST00000451586 SIK1P57059 783 aa32.06■■■□□ 2.72
TPR-202ENST00000451586 RBM42Q9BTD8 480 aaKnown RBP32.06■■■□□ 2.72
TPR-202ENST00000451586 SIPA1L3O60292 1781 aaPredicted RBP32.05■■■□□ 2.72
TPR-202ENST00000451586 SENP3-EIF4A1A0A087X0R7 540 aa32.05■■■□□ 2.72
TPR-202ENST00000451586 LMOD3Q0VAK6 560 aa32.05■■■□□ 2.72
TPR-202ENST00000451586 TRIM35Q9UPQ4 493 aa32.05■■■□□ 2.72
TPR-202ENST00000451586 PTCD1O75127 700 aaKnown RBP32.04■■■□□ 2.72
TPR-202ENST00000451586 NBPF14Q5TI25 921 aa32.04■■■□□ 2.72
TPR-202ENST00000451586 BTBD11A6QL63 1104 aa32.03■■■□□ 2.72
TPR-202ENST00000451586 SLC4A9Q96Q91 983 aa32.02■■■□□ 2.72
TPR-202ENST00000451586 ATP6V1AP38606 617 aa32.01■■■□□ 2.71
TPR-202ENST00000451586 TAF7Q15545 349 aaPredicted RBP32.01■■■□□ 2.71
TPR-202ENST00000451586 ANO8Q9HCE9 1232 aaPredicted RBP32.01■■■□□ 2.71
TPR-202ENST00000451586 KCNQ3O43525 872 aa31.99■■■□□ 2.71
TPR-202ENST00000451586 ZNF790Q6PG37 636 aa31.99■■■□□ 2.71
TPR-202ENST00000451586 MIS18AQ9NYP9 233 aa31.99■■■□□ 2.71
TPR-202ENST00000451586 PAPPAQ13219 1627 aa31.99■■■□□ 2.71
TPR-202ENST00000451586 ITPK1Q13572 414 aa31.98■■■□□ 2.71
TPR-202ENST00000451586 TTC5Q8N0Z6 440 aa31.98■■■□□ 2.71
TPR-202ENST00000451586 STK32BQ9NY57 414 aa31.97■■■□□ 2.71
TPR-202ENST00000451586 PSDA5PKW4 1024 aaPredicted RBP31.96■■■□□ 2.71
TPR-202ENST00000451586 R3HDM1Q15032 1099 aaKnown RBP31.96■■■□□ 2.71
TPR-202ENST00000451586 SLC15A2Q16348 729 aa31.95■■■□□ 2.71
TPR-202ENST00000451586 ZNF827Q17R98 1081 aa31.95■■■□□ 2.71
TPR-202ENST00000451586 TAF1LQ8IZX4 1826 aa31.94■■■□□ 2.7
TPR-202ENST00000451586 LINC00116Q8NCU8 138 aa31.94■■■□□ 2.7
TPR-202ENST00000451586 AKT1S1Q96B36 256 aa31.94■■■□□ 2.7
TPR-202ENST00000451586 KCPQ6ZWJ8 1503 aa31.94■■■□□ 2.7
TPR-202ENST00000451586 ZNF496Q96IT1 587 aaPredicted RBP31.93■■■□□ 2.7
TPR-202ENST00000451586 C5P01031 1676 aa31.92■■■□□ 2.7
TPR-202ENST00000451586 SALL2Q9Y467 1007 aaPredicted RBP31.91■■■□□ 2.7
TPR-202ENST00000451586 UBR2Q8IWV8 1755 aa31.91■■■□□ 2.7
TPR-202ENST00000451586 HMGB2P26583 209 aaKnown RBP31.9■■■□□ 2.7
TPR-202ENST00000451586 ZNF831Q5JPB2 1677 aa31.89■■■□□ 2.7
TPR-202ENST00000451586 DNAJC10Q8IXB1 793 aa31.89■■■□□ 2.7
TPR-202ENST00000451586 FMNL2Q96PY5 1086 aa31.89■■■□□ 2.7
TPR-202ENST00000451586 LAS1LQ9Y4W2 734 aaKnown RBP31.88■■■□□ 2.69
TPR-202ENST00000451586 CCDC27Q2M243 656 aa31.87■■■□□ 2.69
TPR-202ENST00000451586 VSIG10Q8N0Z9 540 aa31.87■■■□□ 2.69
TPR-202ENST00000451586 TSPYL4Q9UJ04 414 aa31.87■■■□□ 2.69
TPR-202ENST00000451586 C4BP0C0L5 1744 aa31.86■■■□□ 2.69
TPR-202ENST00000451586 HEG1Q9ULI3 1381 aa31.86■■■□□ 2.69
TPR-202ENST00000451586 NCBP3Q53F19 620 aaKnown RBP31.86■■■□□ 2.69
TPR-202ENST00000451586 TFCP2L1Q9NZI6 479 aa31.86■■■□□ 2.69
TPR-202ENST00000451586 WWC1Q8IX03 1113 aa31.85■■■□□ 2.69
TPR-202ENST00000451586 TJP1Q07157 1748 aa31.85■■■□□ 2.69
TPR-202ENST00000451586 KDM3BQ7LBC6 1761 aa31.84■■■□□ 2.69
TPR-202ENST00000451586 AK7Q96M32 723 aa31.84■■■□□ 2.69
TPR-202ENST00000451586 BABAM1Q9NWV8 329 aa31.84■■■□□ 2.69
TPR-202ENST00000451586 CHL1O00533 1208 aa31.83■■■□□ 2.69
TPR-202ENST00000451586 EIF4A1P60842 406 aaKnown RBP31.82■■■□□ 2.68
TPR-202ENST00000451586 COL5A3P25940 1745 aaPredicted RBP31.82■■■□□ 2.68
TPR-202ENST00000451586 CALD1Q05682 793 aaKnown RBP31.81■■■□□ 2.68
TPR-202ENST00000451586 RC3H1Q5TC82 1133 aaKnown RBP31.81■■■□□ 2.68
TPR-202ENST00000451586 CFAP44Q96MT7 982 aa31.81■■■□□ 2.68
TPR-202ENST00000451586 PDGFDQ9GZP0 370 aaPredicted RBP31.81■■■□□ 2.68
TPR-202ENST00000451586 CICQ96RK0 1608 aaPredicted RBP31.8■■■□□ 2.68
TPR-202ENST00000451586 PRAMEF22A3QJZ6 481 aa31.8■■■□□ 2.68
TPR-202ENST00000451586 CYP19A1P11511 503 aaPredicted RBP31.8■■■□□ 2.68
TPR-202ENST00000451586 CRKLP46109 303 aaKnown RBP31.8■■■□□ 2.68
TPR-202ENST00000451586 SMIM5Q71RC9 77 aa31.8■■■□□ 2.68
TPR-202ENST00000451586 CNTNAP4Q9C0A0 1308 aa31.79■■■□□ 2.68
TPR-202ENST00000451586 GNPATO15228 680 aa31.79■■■□□ 2.68
TPR-202ENST00000451586 AMIGO3Q86WK7 504 aa31.79■■■□□ 2.68
TPR-202ENST00000451586 TEX13AQ9BXU3 409 aaPredicted RBP31.79■■■□□ 2.68
TPR-202ENST00000451586 MYH14Q7Z406 1995 aaKnown RBP31.79■■■□□ 2.68
TPR-202ENST00000451586 TUBGCP6Q96RT7 1819 aa31.79■■■□□ 2.68
TPR-202ENST00000451586 PNPLA7Q6ZV29 1317 aa31.78■■■□□ 2.68
TPR-202ENST00000451586 SNRPA1P09661 255 aaKnown RBP31.78■■■□□ 2.68
TPR-202ENST00000451586 ZNF853P0CG23 659 aa31.78■■■□□ 2.68
TPR-202ENST00000451586 INTS5Q6P9B9 1019 aaKnown RBP31.77■■■□□ 2.68
TPR-202ENST00000451586 NGEFQ8N5V2 710 aa31.77■■■□□ 2.68
TPR-202ENST00000451586 IFT57Q9NWB7 429 aa31.77■■■□□ 2.68
TPR-202ENST00000451586 USP16Q9Y5T5 823 aa31.77■■■□□ 2.68
TPR-202ENST00000451586 STARD3NLO95772 234 aa31.76■■■□□ 2.67
TPR-202ENST00000451586 GNAI1P63096 354 aa31.76■■■□□ 2.67
TPR-202ENST00000451586 PHF14O94880 888 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms