RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
SNRNP27-203ENST00000450162 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
SNRNP27-203ENST00000450162 ITGB4P16144 1822 aa17.31■□□□□ 0.36
SNRNP27-203ENST00000450162 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
SNRNP27-203ENST00000450162 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
SNRNP27-203ENST00000450162 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
SNRNP27-203ENST00000450162 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
SNRNP27-203ENST00000450162 TEFQ10587 303 aa17.29■□□□□ 0.36
SNRNP27-203ENST00000450162 LOC102724428A0A0B4J2F2 783 aa17.28■□□□□ 0.36
SNRNP27-203ENST00000450162 SIK1P57059 783 aa17.28■□□□□ 0.36
SNRNP27-203ENST00000450162 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
SNRNP27-203ENST00000450162 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
SNRNP27-203ENST00000450162 LY75O60449 1722 aa17.27■□□□□ 0.36
SNRNP27-203ENST00000450162 MRC1P22897 1456 aa17.27■□□□□ 0.36
SNRNP27-203ENST00000450162 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
SNRNP27-203ENST00000450162 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
SNRNP27-203ENST00000450162 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.35
SNRNP27-203ENST00000450162 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
SNRNP27-203ENST00000450162 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
SNRNP27-203ENST00000450162 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
SNRNP27-203ENST00000450162 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
SNRNP27-203ENST00000450162 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
SNRNP27-203ENST00000450162 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
SNRNP27-203ENST00000450162 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
SNRNP27-203ENST00000450162 KCNQ4P56696 695 aa17.23■□□□□ 0.35
SNRNP27-203ENST00000450162 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
SNRNP27-203ENST00000450162 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
SNRNP27-203ENST00000450162 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
SNRNP27-203ENST00000450162 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
SNRNP27-203ENST00000450162 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
SNRNP27-203ENST00000450162 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
SNRNP27-203ENST00000450162 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
SNRNP27-203ENST00000450162 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 RIPK4P57078 832 aa17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 ZNF827Q17R98 1081 aa17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 MCM10Q7L590 875 aa17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
SNRNP27-203ENST00000450162 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 PNISRQ8TF01 805 aaKnown RBP17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 SLC16A10Q8TF71 515 aa17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 AK7Q96M32 723 aa17.2■□□□□ 0.34
SNRNP27-203ENST00000450162 ITPK1Q13572 414 aa17.19■□□□□ 0.34
SNRNP27-203ENST00000450162 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
SNRNP27-203ENST00000450162 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
SNRNP27-203ENST00000450162 CCDC146Q8IYE0 955 aa17.18■□□□□ 0.34
SNRNP27-203ENST00000450162 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
SNRNP27-203ENST00000450162 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
SNRNP27-203ENST00000450162 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 SSFA2P28290 1259 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 DCTN1Q14203 1278 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 BABAM1Q9NWV8 329 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 CNTNAP4Q9C0A0 1308 aa17.17■□□□□ 0.34
SNRNP27-203ENST00000450162 KCNA4P22459 653 aa17.16■□□□□ 0.34
SNRNP27-203ENST00000450162 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SNRNP27-203ENST00000450162 MTFR1LQ9H019 292 aa17.16■□□□□ 0.34
SNRNP27-203ENST00000450162 C5P01031 1676 aa17.16■□□□□ 0.34
SNRNP27-203ENST00000450162 PNPLA7Q6ZV29 1317 aa17.16■□□□□ 0.34
SNRNP27-203ENST00000450162 VIRMAQ69YN4 1812 aaKnown RBP17.15■□□□□ 0.34
SNRNP27-203ENST00000450162 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.34
SNRNP27-203ENST00000450162 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
SNRNP27-203ENST00000450162 STARD3NLO95772 234 aa17.14■□□□□ 0.33
SNRNP27-203ENST00000450162 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
SNRNP27-203ENST00000450162 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SNRNP27-203ENST00000450162 HEG1Q9ULI3 1381 aa17.14■□□□□ 0.33
SNRNP27-203ENST00000450162 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 APAF1O14727 1248 aa17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 GNPATO15228 680 aa17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
SNRNP27-203ENST00000450162 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
SNRNP27-203ENST00000450162 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 CASZ1Q86V15 1759 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
SNRNP27-203ENST00000450162 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
SNRNP27-203ENST00000450162 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-203ENST00000450162 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
SNRNP27-203ENST00000450162 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
SNRNP27-203ENST00000450162 LRP5O75197 1615 aa17.1■□□□□ 0.33
SNRNP27-203ENST00000450162 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms