RNA–Protein interactions for RNA: ENST00000449557.6

SCN5A-207, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 5,898 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-207ENST00000449557 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
SCN5A-207ENST00000449557 NEK4P51957 841 aa13.79□□□□□ -0.2
SCN5A-207ENST00000449557 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
SCN5A-207ENST00000449557 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
SCN5A-207ENST00000449557 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
SCN5A-207ENST00000449557 NAIPQ13075 1403 aa13.79□□□□□ -0.2
SCN5A-207ENST00000449557 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
SCN5A-207ENST00000449557 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
SCN5A-207ENST00000449557 ARGLU1Q9NWB6 273 aaPredicted RBP13.79□□□□□ -0.2
SCN5A-207ENST00000449557 RABEP1Q15276 862 aa13.78□□□□□ -0.2
SCN5A-207ENST00000449557 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
SCN5A-207ENST00000449557 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
SCN5A-207ENST00000449557 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
SCN5A-207ENST00000449557 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.2
SCN5A-207ENST00000449557 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.2
SCN5A-207ENST00000449557 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.2
SCN5A-207ENST00000449557 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 PDCP20941 246 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 IMMTQ16891 758 aaKnown RBP13.77□□□□□ -0.21
SCN5A-207ENST00000449557 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 ACEP12821 1306 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 CDKL5O76039 1030 aa13.77□□□□□ -0.21
SCN5A-207ENST00000449557 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 TRIM5Q9C035 493 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 TMPOP42166 694 aaKnown RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 KINO60870 393 aaKnown RBP13.76□□□□□ -0.21
SCN5A-207ENST00000449557 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 HYPKQ9NX55 129 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 PRXQ9BXM0 1461 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 MBD3O95983 291 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 SPC24Q8NBT2 197 aa13.76□□□□□ -0.21
SCN5A-207ENST00000449557 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-207ENST00000449557 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
SCN5A-207ENST00000449557 TANGO6Q9C0B7 1094 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 CUL5Q93034 780 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 HDAC9Q9UKV0 1011 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-207ENST00000449557 SMC2O95347 1197 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 FILIP1LQ4L180 1135 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 NOS1P29475 1434 aa13.75□□□□□ -0.21
SCN5A-207ENST00000449557 FIBPO43427 364 aa13.74□□□□□ -0.21
SCN5A-207ENST00000449557 NF2P35240 595 aa13.74□□□□□ -0.21
SCN5A-207ENST00000449557 STIM1Q13586 685 aa13.74□□□□□ -0.21
SCN5A-207ENST00000449557 NAPBQ9H115 298 aa13.74□□□□□ -0.21
SCN5A-207ENST00000449557 MVPQ14764 893 aaKnown RBP13.74□□□□□ -0.21
SCN5A-207ENST00000449557 NEBLO76041 1014 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 PIP4K2AP48426 406 aaPredicted RBP13.73□□□□□ -0.21
SCN5A-207ENST00000449557 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 LDHCP07864 332 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
SCN5A-207ENST00000449557 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 DBF4Q9UBU7 674 aaPredicted RBP13.73□□□□□ -0.21
SCN5A-207ENST00000449557 CUL7Q14999 1698 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
SCN5A-207ENST00000449557 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
SCN5A-207ENST00000449557 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
SCN5A-207ENST00000449557 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 MCM2P49736 904 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 MTERF4Q7Z6M4 381 aaKnown RBP13.72□□□□□ -0.21
SCN5A-207ENST00000449557 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
SCN5A-207ENST00000449557 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 CHD1LQ86WJ1 897 aa13.72□□□□□ -0.21
SCN5A-207ENST00000449557 MPNDQ8N594 471 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 WASF1Q92558 559 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 ACBD3Q9H3P7 528 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 DESP17661 470 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.21
SCN5A-207ENST00000449557 LDHAL6AQ6ZMR3 332 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 DNAI2Q9GZS0 605 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 EHMT1Q9H9B1 1298 aa13.71□□□□□ -0.21
SCN5A-207ENST00000449557 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.22
SCN5A-207ENST00000449557 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.22
SCN5A-207ENST00000449557 BAG3O95817 575 aa13.7□□□□□ -0.22
SCN5A-207ENST00000449557 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
SCN5A-207ENST00000449557 CCDC152Q4G0S7 254 aa13.7□□□□□ -0.22
SCN5A-207ENST00000449557 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
SCN5A-207ENST00000449557 CAGE1Q8TC20 777 aa13.7□□□□□ -0.22
SCN5A-207ENST00000449557 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
SCN5A-207ENST00000449557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCN5A-207ENST00000449557 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms