RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 LGR6Q9HBX8 967 aa14.1□□□□□ -0.15
SMPD4-211ENST00000449159 GNAT3A8MTJ3 354 aa14.09□□□□□ -0.15
SMPD4-211ENST00000449159 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
SMPD4-211ENST00000449159 NEFMP07197 916 aa14.08□□□□□ -0.16
SMPD4-211ENST00000449159 NFE2L2Q16236 605 aa14.08□□□□□ -0.16
SMPD4-211ENST00000449159 IL17REQ8NFR9 667 aa14.08□□□□□ -0.16
SMPD4-211ENST00000449159 PIGBQ92521 554 aa14.08□□□□□ -0.16
SMPD4-211ENST00000449159 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
SMPD4-211ENST00000449159 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
SMPD4-211ENST00000449159 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
SMPD4-211ENST00000449159 SENP3-EIF4A1A0A087X0R7 540 aa14.07□□□□□ -0.16
SMPD4-211ENST00000449159 ERVV-2B6SEH9 535 aa14.07□□□□□ -0.16
SMPD4-211ENST00000449159 DCTN1Q14203 1278 aa14.07□□□□□ -0.16
SMPD4-211ENST00000449159 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
SMPD4-211ENST00000449159 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
SMPD4-211ENST00000449159 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
SMPD4-211ENST00000449159 TMPOP42166 694 aaKnown RBP14.06□□□□□ -0.16
SMPD4-211ENST00000449159 MCM10Q7L590 875 aa14.06□□□□□ -0.16
SMPD4-211ENST00000449159 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
SMPD4-211ENST00000449159 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
SMPD4-211ENST00000449159 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
SMPD4-211ENST00000449159 UBR2Q8IWV8 1755 aa14.05□□□□□ -0.16
SMPD4-211ENST00000449159 CABP4P57796 275 aa14.05□□□□□ -0.16
SMPD4-211ENST00000449159 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
SMPD4-211ENST00000449159 GOLGB1Q14789 3259 aaKnown RBP14.04□□□□□ -0.16
SMPD4-211ENST00000449159 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 RIPK4P57078 832 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 PROM2Q8N271 834 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
SMPD4-211ENST00000449159 THUMPD2Q9BTF0 503 aaKnown RBP14.04□□□□□ -0.16
SMPD4-211ENST00000449159 SLC52A2Q9HAB3 445 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 C5P01031 1676 aa14.04□□□□□ -0.16
SMPD4-211ENST00000449159 APAF1O14727 1248 aa14.03□□□□□ -0.16
SMPD4-211ENST00000449159 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
SMPD4-211ENST00000449159 PDGFDQ9GZP0 370 aaPredicted RBP14.03□□□□□ -0.16
SMPD4-211ENST00000449159 KDM3BQ7LBC6 1761 aa14.02□□□□□ -0.16
SMPD4-211ENST00000449159 PTGER2P43116 358 aa14.02□□□□□ -0.17
SMPD4-211ENST00000449159 KCNQ4P56696 695 aa14.02□□□□□ -0.17
SMPD4-211ENST00000449159 TEFQ10587 303 aa14.02□□□□□ -0.17
SMPD4-211ENST00000449159 ATG3Q9NT62 314 aa14.02□□□□□ -0.17
SMPD4-211ENST00000449159 TJP1Q07157 1748 aa14.01□□□□□ -0.17
SMPD4-211ENST00000449159 KCPQ6ZWJ8 1503 aa14.01□□□□□ -0.17
SMPD4-211ENST00000449159 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
SMPD4-211ENST00000449159 SLC15A2Q16348 729 aa14.01□□□□□ -0.17
SMPD4-211ENST00000449159 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
SMPD4-211ENST00000449159 COL5A3P25940 1745 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-211ENST00000449159 ZNF831Q5JPB2 1677 aa14.01□□□□□ -0.17
SMPD4-211ENST00000449159 SLC39A6Q13433 755 aa14□□□□□ -0.17
SMPD4-211ENST00000449159 MTFR1LQ9H019 292 aa14□□□□□ -0.17
SMPD4-211ENST00000449159 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
SMPD4-211ENST00000449159 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-211ENST00000449159 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-211ENST00000449159 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-211ENST00000449159 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
SMPD4-211ENST00000449159 FHDC1Q9C0D6 1143 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-211ENST00000449159 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-211ENST00000449159 LOC102724428A0A0B4J2F2 783 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 KCNQ3O43525 872 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
SMPD4-211ENST00000449159 SIK1P57059 783 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
SMPD4-211ENST00000449159 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 C4BP0C0L5 1744 aa13.97□□□□□ -0.17
SMPD4-211ENST00000449159 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.17
SMPD4-211ENST00000449159 ITPK1Q13572 414 aa13.96□□□□□ -0.17
SMPD4-211ENST00000449159 SLC27A3Q5K4L6 730 aa13.96□□□□□ -0.17
SMPD4-211ENST00000449159 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
SMPD4-211ENST00000449159 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
SMPD4-211ENST00000449159 TAF7Q15545 349 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-211ENST00000449159 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
SMPD4-211ENST00000449159 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
SMPD4-211ENST00000449159 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-211ENST00000449159 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
SMPD4-211ENST00000449159 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
SMPD4-211ENST00000449159 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
SMPD4-211ENST00000449159 ZNF784Q8NCA9 323 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-211ENST00000449159 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
SMPD4-211ENST00000449159 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-211ENST00000449159 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
SMPD4-211ENST00000449159 ARXQ96QS3 562 aa13.93□□□□□ -0.18
SMPD4-211ENST00000449159 CCDC27Q2M243 656 aa13.92□□□□□ -0.18
SMPD4-211ENST00000449159 WWC1Q8IX03 1113 aa13.92□□□□□ -0.18
SMPD4-211ENST00000449159 LAS1LQ9Y4W2 734 aaKnown RBP13.92□□□□□ -0.18
SMPD4-211ENST00000449159 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
SMPD4-211ENST00000449159 DNAJC10Q8IXB1 793 aa13.91□□□□□ -0.18
SMPD4-211ENST00000449159 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
SMPD4-211ENST00000449159 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SMPD4-211ENST00000449159 PRAMEF22A3QJZ6 481 aa13.9□□□□□ -0.18
SMPD4-211ENST00000449159 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
SMPD4-211ENST00000449159 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
SMPD4-211ENST00000449159 CHL1O00533 1208 aa13.89□□□□□ -0.19
SMPD4-211ENST00000449159 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
SMPD4-211ENST00000449159 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
SMPD4-211ENST00000449159 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms