RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
RCL1-208ENST00000448872 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
RCL1-208ENST00000448872 ZNF521Q96K83 1311 aa15.53■□□□□ 0.08
RCL1-208ENST00000448872 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
RCL1-208ENST00000448872 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
RCL1-208ENST00000448872 ASAP1Q9ULH1 1129 aa15.52■□□□□ 0.08
RCL1-208ENST00000448872 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
RCL1-208ENST00000448872 TOGARAM1Q9Y4F4 1720 aa15.52■□□□□ 0.07
RCL1-208ENST00000448872 KCNQ3O43525 872 aa15.52■□□□□ 0.07
RCL1-208ENST00000448872 MRC1P22897 1456 aa15.51■□□□□ 0.07
RCL1-208ENST00000448872 BTBD11A6QL63 1104 aa15.51■□□□□ 0.07
RCL1-208ENST00000448872 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
RCL1-208ENST00000448872 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
RCL1-208ENST00000448872 ADAMTS7Q9UKP4 1686 aa15.5■□□□□ 0.07
RCL1-208ENST00000448872 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
RCL1-208ENST00000448872 NGEFQ8N5V2 710 aa15.49■□□□□ 0.07
RCL1-208ENST00000448872 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
RCL1-208ENST00000448872 CHL1O00533 1208 aa15.48■□□□□ 0.07
RCL1-208ENST00000448872 APBA3O96018 575 aa15.48■□□□□ 0.07
RCL1-208ENST00000448872 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
RCL1-208ENST00000448872 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
RCL1-208ENST00000448872 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
RCL1-208ENST00000448872 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
RCL1-208ENST00000448872 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
RCL1-208ENST00000448872 MBIPQ9NS73 344 aa15.47■□□□□ 0.07
RCL1-208ENST00000448872 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
RCL1-208ENST00000448872 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
RCL1-208ENST00000448872 KCNQ4P56696 695 aa15.46■□□□□ 0.07
RCL1-208ENST00000448872 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
RCL1-208ENST00000448872 ZNF790Q6PG37 636 aa15.46■□□□□ 0.07
RCL1-208ENST00000448872 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.071e-8■■□□□ 12.6
RCL1-208ENST00000448872 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
RCL1-208ENST00000448872 PALLDQ8WX93 1383 aa15.46■□□□□ 0.07
RCL1-208ENST00000448872 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.06
RCL1-208ENST00000448872 GOLGA2Q08379 1002 aa15.46■□□□□ 0.06
RCL1-208ENST00000448872 KRT24Q2M2I5 525 aa15.46■□□□□ 0.06
RCL1-208ENST00000448872 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 NHSQ6T4R5 1651 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 GNAI1P63096 354 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 DEFB132Q7Z7B7 95 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
RCL1-208ENST00000448872 SLC4A9Q96Q91 983 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 IL16Q14005 1332 aa15.45■□□□□ 0.06
RCL1-208ENST00000448872 EN1Q05925 392 aaPredicted RBP15.44■□□□□ 0.06
RCL1-208ENST00000448872 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
RCL1-208ENST00000448872 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
RCL1-208ENST00000448872 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
RCL1-208ENST00000448872 DLG5Q8TDM6 1919 aa15.44■□□□□ 0.06
RCL1-208ENST00000448872 PRAMEF22A3QJZ6 481 aa15.43■□□□□ 0.06
RCL1-208ENST00000448872 EIF4A1P60842 406 aaKnown RBP15.43■□□□□ 0.06
RCL1-208ENST00000448872 SLFN5Q08AF3 891 aa15.43■□□□□ 0.06
RCL1-208ENST00000448872 PROM2Q8N271 834 aa15.43■□□□□ 0.06
RCL1-208ENST00000448872 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
RCL1-208ENST00000448872 LOC102724428A0A0B4J2F2 783 aa15.42■□□□□ 0.06
RCL1-208ENST00000448872 SIK1P57059 783 aa15.42■□□□□ 0.06
RCL1-208ENST00000448872 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
RCL1-208ENST00000448872 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
RCL1-208ENST00000448872 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
RCL1-208ENST00000448872 KCPQ6ZWJ8 1503 aa15.42■□□□□ 0.06
RCL1-208ENST00000448872 E9PSI1 815 aa15.41■□□□□ 0.06
RCL1-208ENST00000448872 EZH2Q15910 746 aaKnown RBP15.41■□□□□ 0.06
RCL1-208ENST00000448872 LRRC4BQ9NT99 713 aa15.41■□□□□ 0.06
RCL1-208ENST00000448872 PLSCR1O15162 318 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 ITPK1Q13572 414 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 C8orf58Q8NAV2 365 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 FMNL2Q96PY5 1086 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 CAMKK2Q96RR4 588 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
RCL1-208ENST00000448872 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 CCDC125Q86Z20 511 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 TRMT2AQ8IZ69 625 aaKnown RBP15.4■□□□□ 0.06
RCL1-208ENST00000448872 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
RCL1-208ENST00000448872 CCNL1Q9UK58 526 aaPredicted RBP15.4■□□□□ 0.06
RCL1-208ENST00000448872 HEG1Q9ULI3 1381 aa15.39■□□□□ 0.05
RCL1-208ENST00000448872 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
RCL1-208ENST00000448872 BAG6P46379 1132 aa15.39■□□□□ 0.05
RCL1-208ENST00000448872 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
RCL1-208ENST00000448872 DNAJC10Q8IXB1 793 aa15.39■□□□□ 0.05
RCL1-208ENST00000448872 SBF2Q86WG5 1849 aa15.38■□□□□ 0.05
RCL1-208ENST00000448872 LINC00116Q8NCU8 138 aa15.38■□□□□ 0.05
RCL1-208ENST00000448872 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
RCL1-208ENST00000448872 BTAF1O14981 1849 aa15.38■□□□□ 0.05
RCL1-208ENST00000448872 ITGB4P16144 1822 aa15.38■□□□□ 0.05
RCL1-208ENST00000448872 SIPA1L3O60292 1781 aaPredicted RBP15.37■□□□□ 0.05
RCL1-208ENST00000448872 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
RCL1-208ENST00000448872 SNRPA1P09661 255 aaKnown RBP15.37■□□□□ 0.05
RCL1-208ENST00000448872 USP16Q9Y5T5 823 aa15.37■□□□□ 0.05
RCL1-208ENST00000448872 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
RCL1-208ENST00000448872 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
RCL1-208ENST00000448872 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
RCL1-208ENST00000448872 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
RCL1-208ENST00000448872 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
RCL1-208ENST00000448872 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.05
RCL1-208ENST00000448872 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.05
RCL1-208ENST00000448872 SMIM5Q71RC9 77 aa15.33■□□□□ 0.05
RCL1-208ENST00000448872 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
RCL1-208ENST00000448872 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 296.3 ms